Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 CDC33YOL139C 642 nt3.9□□□□□ -1.79
DEF1P35732 HRD1YOL013C 1656 nt3.9□□□□□ -1.79
DEF1P35732 VPS27YNR006W 1869 nt3.9□□□□□ -1.79
DEF1P35732 UBP5YER144C 2418 nt3.9□□□□□ -1.79
DEF1P35732 MDN1YLR106C 14733 nt3.89□□□□□ -1.79
DEF1P35732 RTT105YER104W 627 nt3.89□□□□□ -1.79
DEF1P35732 YGL074CYGL074C 327 nt3.89□□□□□ -1.79
DEF1P35732 YHR032C-AYHR032C-A 120 nt3.89□□□□□ -1.79
DEF1P35732 YKL069WYKL069W 543 nt3.89□□□□□ -1.79
DEF1P35732 VPS63YLR261C 327 nt3.89□□□□□ -1.79
DEF1P35732 NOP15YNL110C 663 nt3.89□□□□□ -1.79
DEF1P35732 AFT2YPL202C 1251 nt3.89□□□□□ -1.79
DEF1P35732 YPR010C-AYPR010C-A 219 nt3.89□□□□□ -1.79
DEF1P35732 GWT1YJL091C 1473 nt3.89□□□□□ -1.79
DEF1P35732 PRS5YOL061W 1491 nt3.89□□□□□ -1.79
DEF1P35732 PPQ1YPL179W 1650 nt3.89□□□□□ -1.79
DEF1P35732 ASI1YMR119W 1875 nt3.89□□□□□ -1.79
DEF1P35732 YML096WYML096W 1578 nt3.89□□□□□ -1.79
DEF1P35732 ROM1YGR070W 3468 nt3.89□□□□□ -1.79
DEF1P35732 SWC4YGR002C 1431 nt3.88□□□□□ -1.79
DEF1P35732 AYT1YLL063C 1425 nt3.88□□□□□ -1.79
DEF1P35732 URC2YDR520C 2319 nt3.88□□□□□ -1.79
DEF1P35732 CDH1YGL003C 1701 nt3.88□□□□□ -1.79
DEF1P35732 YDR133CYDR133C 336 nt3.88□□□□□ -1.79
DEF1P35732 AHA1YDR214W 1053 nt3.88□□□□□ -1.79
DEF1P35732 YIL054WYIL054W 318 nt3.88□□□□□ -1.79
DEF1P35732 YMR320WYMR320W 306 nt3.88□□□□□ -1.79
DEF1P35732 YNL276CYNL276C 396 nt3.88□□□□□ -1.79
DEF1P35732 YBR032WYBR032W 303 nt3.88□□□□□ -1.79
DEF1P35732 YOP1YPR028W 543 nt3.88□□□□□ -1.79
DEF1P35732 EMP70YLR083C 2004 nt3.88□□□□□ -1.79
DEF1P35732 UBP12YJL197W 3765 nt3.88□□□□□ -1.79
DEF1P35732 snR59snR59 78 nt3.87□□□□□ -1.79
DEF1P35732 OTU2YHL013C 924 nt3.87□□□□□ -1.79
DEF1P35732 DFG10YIL049W 762 nt3.87□□□□□ -1.79
DEF1P35732 RGI2YIL057C 495 nt3.87□□□□□ -1.79
DEF1P35732 YKL068W-AYKL068W-A 237 nt3.87□□□□□ -1.79
DEF1P35732 YLR434CYLR434C 384 nt3.87□□□□□ -1.79
DEF1P35732 GRE2YOL151W 1029 nt3.87□□□□□ -1.79
DEF1P35732 CMD1YBR109C 444 nt3.87□□□□□ -1.79
DEF1P35732 TPD3YAL016W 1908 nt3.87□□□□□ -1.79
DEF1P35732 NCS2YNL119W 1482 nt3.86□□□□□ -1.79
DEF1P35732 TOP1YOL006C 2310 nt3.86□□□□□ -1.79
DEF1P35732 YPR022CYPR022C 3402 nt3.86□□□□□ -1.79
DEF1P35732 RPS14AYCR031C 414 nt3.86□□□□□ -1.79
DEF1P35732 YFL015CYFL015C 495 nt3.86□□□□□ -1.79
DEF1P35732 YHR063W-AYHR063W-A 336 nt3.86□□□□□ -1.79
DEF1P35732 tV(CAC)DtV(CAC)D 73 nt3.86□□□□□ -1.79
DEF1P35732 tV(CAC)HtV(CAC)H 73 nt3.86□□□□□ -1.79
DEF1P35732 YJL197C-AYJL197C-A 282 nt3.86□□□□□ -1.79
DEF1P35732 YJR111CYJR111C 852 nt3.86□□□□□ -1.79
DEF1P35732 YNL184CYNL184C 327 nt3.86□□□□□ -1.79
DEF1P35732 YNR063WYNR063W 1824 nt3.86□□□□□ -1.79
DEF1P35732 JEN1YKL217W 1851 nt3.86□□□□□ -1.79
DEF1P35732 RRI2YOL117W 1938 nt3.85□□□□□ -1.79
DEF1P35732 SEC59YMR013C 1560 nt3.85□□□□□ -1.79
DEF1P35732 AIM14YGL160W 1713 nt3.85□□□□□ -1.79
DEF1P35732 CTM1YHR109W 1758 nt3.85□□□□□ -1.79
DEF1P35732 GRX2YDR513W 432 nt3.85□□□□□ -1.79
DEF1P35732 YDR537CYDR537C 606 nt3.85□□□□□ -1.79
DEF1P35732 tM(CAU)Q1tM(CAU)Q1 76 nt3.85□□□□□ -1.79
DEF1P35732 NBL1YHR199C-A 222 nt3.85□□□□□ -1.79
DEF1P35732 YBR209WYBR209W 318 nt3.85□□□□□ -1.79
DEF1P35732 DAN4YJR151C 3486 nt3.85□□□□□ -1.79
DEF1P35732 MAK5YBR142W 2322 nt3.84□□□□□ -1.79
DEF1P35732 DYN2YDR424C 279 nt3.84□□□□□ -1.79
DEF1P35732 YAL063C-AYAL063C-A 291 nt3.84□□□□□ -1.79
DEF1P35732 YOR121CYOR121C 306 nt3.84□□□□□ -1.79
DEF1P35732 IRC16YPR038W 360 nt3.84□□□□□ -1.79
DEF1P35732 SHE4YOR035C 2370 nt3.84□□□□□ -1.79
DEF1P35732 FLO1YAR050W 4614 nt3.84□□□□□ -1.8
DEF1P35732 YAT2YER024W 2772 nt3.84□□□□□ -1.8
DEF1P35732 CCT7YJL111W 1653 nt3.84□□□□□ -1.8
DEF1P35732 RPO21YDL140C 5202 nt3.83□□□□□ -1.8
DEF1P35732 YMR317WYMR317W 3423 nt3.83□□□□□ -1.8
DEF1P35732 GPP2YER062C 753 nt3.83□□□□□ -1.8
DEF1P35732 LAG1YHL003C 1236 nt3.83□□□□□ -1.8
DEF1P35732 TDA8YAL064C-A 381 nt3.83□□□□□ -1.8
DEF1P35732 DIB1YPR082C 432 nt3.83□□□□□ -1.8
DEF1P35732 TAO3YIL129C 7131 nt3.83□□□□□ -1.8
DEF1P35732 KIN4YOR233W 2403 nt3.83□□□□□ -1.8
DEF1P35732 UTP25YIL091C 2166 nt3.82□□□□□ -1.8
DEF1P35732 CHA4YLR098C 1947 nt3.82□□□□□ -1.8
DEF1P35732 DSN1YIR010W 1731 nt3.82□□□□□ -1.8
DEF1P35732 SPE1YKL184W 1401 nt3.82□□□□□ -1.8
DEF1P35732 BFR1YOR198C 1413 nt3.82□□□□□ -1.8
DEF1P35732 MFA1YDR461W 111 nt3.82□□□□□ -1.8
DEF1P35732 YKE2YLR200W 345 nt3.82□□□□□ -1.8
DEF1P35732 BET5YML077W 480 nt3.82□□□□□ -1.8
DEF1P35732 YMR013C-AYMR013C-A 150 nt3.82□□□□□ -1.8
DEF1P35732 RIM9YMR063W 720 nt3.82□□□□□ -1.8
DEF1P35732 PKR1YMR123W 369 nt3.82□□□□□ -1.8
DEF1P35732 YNL198CYNL198C 303 nt3.82□□□□□ -1.8
DEF1P35732 POL2YNL262W 6669 nt3.82□□□□□ -1.8
DEF1P35732 NDT80YHR124W 1884 nt3.81□□□□□ -1.8
DEF1P35732 YDR262WYDR262W 819 nt3.81□□□□□ -1.8
DEF1P35732 HIS5YIL116W 1158 nt3.81□□□□□ -1.8
DEF1P35732 RPS16AYMR143W 432 nt3.81□□□□□ -1.8
DEF1P35732 YMR304C-AYMR304C-A 351 nt3.81□□□□□ -1.8
DEF1P35732 KAP104YBR017C 2757 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms