Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHA13Q9Y5I0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 AL136162.1-201ENST00000607711 1078 ntBASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 FP700111.2-201ENST00000619190 1892 ntBASIC22.2■■□□□ 1.14
PCDHA13Q9Y5I0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 AC105233.4-201ENST00000642045 216 ntBASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHA13Q9Y5I0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHA13Q9Y5I0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 AFG3L1P-217ENST00000557444 2447 ntBASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 AC008764.7-201ENST00000593779 1081 ntBASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHA13Q9Y5I0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 AL162377.1-201ENST00000618844 1793 ntBASIC22.16■■□□□ 1.14
PCDHA13Q9Y5I0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms