Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SH3TC1Q8TE82 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SH3TC1Q8TE82 MCRIP2P1-201ENST00000394346 511 ntBASIC26.05■■□□□ 1.76
SH3TC1Q8TE82 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
SH3TC1Q8TE82 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 PTPA-214ENST00000423100 988 ntTSL 2 BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 GATS-209ENST00000454084 1030 ntTSL 3 BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SH3TC1Q8TE82 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 RPS2P52-201ENST00000469610 820 ntBASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 AC006058.3-201ENST00000606217 1069 ntBASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SH3TC1Q8TE82 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SH3TC1Q8TE82 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SH3TC1Q8TE82 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SH3TC1Q8TE82 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SH3TC1Q8TE82 AC007322.3-201ENST00000426526 701 ntBASIC26.02■■□□□ 1.76
SH3TC1Q8TE82 AL589743.5-201ENST00000616611 1050 ntBASIC26.02■■□□□ 1.76
SH3TC1Q8TE82 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SH3TC1Q8TE82 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SH3TC1Q8TE82 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SH3TC1Q8TE82 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 AC026366.1-201ENST00000488803 879 ntBASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SH3TC1Q8TE82 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SH3TC1Q8TE82 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26■■□□□ 1.75
SH3TC1Q8TE82 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26■■□□□ 1.75
SH3TC1Q8TE82 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26■■□□□ 1.75
SH3TC1Q8TE82 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26■■□□□ 1.75
SH3TC1Q8TE82 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
SH3TC1Q8TE82 GCSHP5-201ENST00000443090 522 ntBASIC26■■□□□ 1.75
SH3TC1Q8TE82 AC128676.1-201ENST00000454392 318 ntBASIC26■■□□□ 1.75
SH3TC1Q8TE82 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26■■□□□ 1.75
SH3TC1Q8TE82 AP003097.1-201ENST00000530657 1135 ntBASIC26■■□□□ 1.75
SH3TC1Q8TE82 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26■■□□□ 1.75
SH3TC1Q8TE82 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26■■□□□ 1.75
SH3TC1Q8TE82 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26■■□□□ 1.75
SH3TC1Q8TE82 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SH3TC1Q8TE82 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SH3TC1Q8TE82 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SH3TC1Q8TE82 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SH3TC1Q8TE82 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
SH3TC1Q8TE82 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SH3TC1Q8TE82 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SH3TC1Q8TE82 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SH3TC1Q8TE82 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 KRT18P68-201ENST00000392293 1000 ntBASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SH3TC1Q8TE82 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SH3TC1Q8TE82 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SH3TC1Q8TE82 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SH3TC1Q8TE82 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
SH3TC1Q8TE82 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.97■■□□□ 1.75
SH3TC1Q8TE82 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SH3TC1Q8TE82 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SH3TC1Q8TE82 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.97■■□□□ 1.75
SH3TC1Q8TE82 AC060766.5-201ENST00000590539 871 ntBASIC25.97■■□□□ 1.75
SH3TC1Q8TE82 HLA-B-256ENST00000639848 1089 ntBASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms