Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.05■□□□□ 0.8
KRT78Q8N1N4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.04■□□□□ 0.8
KRT78Q8N1N4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 AC026271.2-201ENST00000428091 497 ntBASIC20.03■□□□□ 0.8
KRT78Q8N1N4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KRT78Q8N1N4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 AC245052.3-201ENST00000450182 901 ntBASIC20.02■□□□□ 0.8
KRT78Q8N1N4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
KRT78Q8N1N4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.02■□□□□ 0.79
KRT78Q8N1N4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.02■□□□□ 0.79
KRT78Q8N1N4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KRT78Q8N1N4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.01■□□□□ 0.79
KRT78Q8N1N4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KRT78Q8N1N4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT78Q8N1N4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20■□□□□ 0.79
KRT78Q8N1N4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT78Q8N1N4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20■□□□□ 0.79
KRT78Q8N1N4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT78Q8N1N4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT78Q8N1N4 MIR5787-201ENST00000611784 55 ntBASIC20■□□□□ 0.79
KRT78Q8N1N4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20■□□□□ 0.79
KRT78Q8N1N4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KRT78Q8N1N4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20■□□□□ 0.79
KRT78Q8N1N4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KRT78Q8N1N4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20■□□□□ 0.79
KRT78Q8N1N4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KRT78Q8N1N4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20■□□□□ 0.79
KRT78Q8N1N4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KRT78Q8N1N4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20■□□□□ 0.79
KRT78Q8N1N4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT78Q8N1N4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms