Protein–RNA interactions for Protein: P38712

RRP3, ATP-dependent rRNA helicase RRP3, yeast

Known RBP Predictions only

Length 501 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP3	P38712	CAF130	YGR134W	3369 nt		3	□□□□□ -1.93
RRP3	P38712	IMH1	YLR309C	2736 nt		3	□□□□□ -1.93
RRP3	P38712	AFR1	YDR085C	1863 nt		3	□□□□□ -1.93
RRP3	P38712	POL3	YDL102W	3294 nt		3	□□□□□ -1.93
RRP3	P38712	BCH1	YMR237W	2175 nt		3	□□□□□ -1.93
RRP3	P38712	ITT1	YML068W	1395 nt		3	□□□□□ -1.93
RRP3	P38712	RAD5	YLR032W	3510 nt		2.99	□□□□□ -1.93
RRP3	P38712	SLK19	YOR195W	2466 nt		2.99	□□□□□ -1.93
RRP3	P38712	YDR089W	YDR089W	2610 nt		2.99	□□□□□ -1.93
RRP3	P38712	KAP104	YBR017C	2757 nt		2.99	□□□□□ -1.93
RRP3	P38712	ADY4	YLR227C	1482 nt		2.99	□□□□□ -1.93
RRP3	P38712	snR59	snR59	78 nt		2.99	□□□□□ -1.93
RRP3	P38712	snR68	snR68	136 nt		2.99	□□□□□ -1.93
RRP3	P38712	SNA4	YDL123W	423 nt		2.99	□□□□□ -1.93
RRP3	P38712	YER165C-A	YER165C-A	357 nt		2.99	□□□□□ -1.93
RRP3	P38712	RSR1	YGR152C	819 nt		2.99	□□□□□ -1.93
RRP3	P38712	MVB12	YGR206W	306 nt		2.99	□□□□□ -1.93
RRP3	P38712	VMA10	YHR039C-A	345 nt		2.99	□□□□□ -1.93
RRP3	P38712	YIL141W	YIL141W	390 nt		2.99	□□□□□ -1.93
RRP3	P38712	TMA108	YIL137C	2841 nt		2.99	□□□□□ -1.93
RRP3	P38712	SNT1	YCR033W	3681 nt		2.99	□□□□□ -1.93
RRP3	P38712	YSP2	YDR326C	4317 nt		2.99	□□□□□ -1.93
RRP3	P38712	VAC8	YEL013W	1737 nt		2.99	□□□□□ -1.93
RRP3	P38712	CDH1	YGL003C	1701 nt		2.99	□□□□□ -1.93
RRP3	P38712	TOP1	YOL006C	2310 nt		2.98	□□□□□ -1.93
RRP3	P38712	YEL025C	YEL025C	3567 nt		2.98	□□□□□ -1.93
RRP3	P38712	SKO1	YNL167C	1944 nt		2.98	□□□□□ -1.93
RRP3	P38712	GRX2	YDR513W	432 nt		2.98	□□□□□ -1.93
RRP3	P38712	YER175W-A	YER175W-A	165 nt		2.98	□□□□□ -1.93
RRP3	P38712	PRM8	YGL053W	714 nt		2.98	□□□□□ -1.93
RRP3	P38712	YGR073C	YGR073C	372 nt		2.98	□□□□□ -1.93
RRP3	P38712	YKL033W-A	YKL033W-A	711 nt		2.98	□□□□□ -1.93
RRP3	P38712	RPL13B	YMR142C	600 nt		2.98	□□□□□ -1.93
RRP3	P38712	SPC29	YPL124W	762 nt		2.98	□□□□□ -1.93
RRP3	P38712	YPR145C-A	YPR145C-A	237 nt		2.98	□□□□□ -1.93
RRP3	P38712	ISM1	YPL040C	3009 nt		2.98	□□□□□ -1.93
RRP3	P38712	EBS1	YDR206W	2655 nt		2.98	□□□□□ -1.93
RRP3	P38712	RSE1	YML049C	4086 nt		2.98	□□□□□ -1.93
RRP3	P38712	VIP1	YLR410W	3441 nt		2.97	□□□□□ -1.93
RRP3	P38712	SNU56	YDR240C	1479 nt		2.97	□□□□□ -1.93
RRP3	P38712	GAL80	YML051W	1308 nt		2.97	□□□□□ -1.93
RRP3	P38712	YOR343W-A	YOR343W-A	1317 nt		2.97	□□□□□ -1.93
RRP3	P38712	ASM4	YDL088C	1587 nt		2.97	□□□□□ -1.93
RRP3	P38712	YDL176W	YDL176W	2127 nt		2.97	□□□□□ -1.93
RRP3	P38712	YDR118W-A	YDR118W-A	117 nt		2.97	□□□□□ -1.93
RRP3	P38712	SMX2	YFL017W-A	234 nt		2.97	□□□□□ -1.93
RRP3	P38712	RPL1B	YGL135W	654 nt		2.97	□□□□□ -1.93
RRP3	P38712	CSE4	YKL049C	690 nt		2.97	□□□□□ -1.93
RRP3	P38712	YKL156C-A	YKL156C-A	117 nt		2.97	□□□□□ -1.93
RRP3	P38712	YLR076C	YLR076C	423 nt		2.97	□□□□□ -1.93
RRP3	P38712	YLR400W	YLR400W	474 nt		2.97	□□□□□ -1.93
RRP3	P38712	COX14	YML129C	213 nt		2.97	□□□□□ -1.93
RRP3	P38712	GIS2	YNL255C	462 nt		2.97	□□□□□ -1.93
RRP3	P38712	CSI2	YOL007C	1026 nt		2.97	□□□□□ -1.93
RRP3	P38712	YPL205C	YPL205C	345 nt		2.97	□□□□□ -1.93
RRP3	P38712	RPL1A	YPL220W	654 nt		2.97	□□□□□ -1.93
RRP3	P38712	MBA1	YBR185C	837 nt		2.97	□□□□□ -1.93
RRP3	P38712	FAA2	YER015W	2235 nt		2.97	□□□□□ -1.93
RRP3	P38712	BEM4	YPL161C	1902 nt		2.97	□□□□□ -1.93
RRP3	P38712	POL4	YCR014C	1749 nt		2.96	□□□□□ -1.93
RRP3	P38712	FAR1	YJL157C	2493 nt		2.96	□□□□□ -1.94
RRP3	P38712	YME2	YMR302C	2553 nt		2.96	□□□□□ -1.94
RRP3	P38712	VTC4	YJL012C	2166 nt		2.96	□□□□□ -1.94
RRP3	P38712	YEL075C	YEL075C	369 nt		2.96	□□□□□ -1.94
RRP3	P38712	PUG1	YER185W	912 nt		2.96	□□□□□ -1.94
RRP3	P38712	YIR020C	YIR020C	303 nt		2.96	□□□□□ -1.94
RRP3	P38712	YJL007C	YJL007C	315 nt		2.96	□□□□□ -1.94
RRP3	P38712	YLR264C-A	YLR264C-A	117 nt		2.96	□□□□□ -1.94
RRP3	P38712	YMR141C	YMR141C	309 nt		2.96	□□□□□ -1.94
RRP3	P38712	PAI3	YMR174C	207 nt		2.96	□□□□□ -1.94
RRP3	P38712	YNL203C	YNL203C	612 nt		2.96	□□□□□ -1.94
RRP3	P38712	PDR17	YNL264C	1053 nt		2.96	□□□□□ -1.94
RRP3	P38712	YNR034W-A	YNR034W-A	297 nt		2.96	□□□□□ -1.94
RRP3	P38712	MPD2	YOL088C	834 nt		2.96	□□□□□ -1.94
RRP3	P38712	RPB5	YBR154C	648 nt		2.96	□□□□□ -1.94
RRP3	P38712	STI1	YOR027W	1770 nt		2.96	□□□□□ -1.94
RRP3	P38712	MIT1	YEL007W	2001 nt		2.96	□□□□□ -1.94
RRP3	P38712	YKL075C	YKL075C	1353 nt		2.96	□□□□□ -1.94
RRP3	P38712	SRP68	YPL243W	1800 nt		2.96	□□□□□ -1.94
RRP3	P38712	YDR199W	YDR199W	366 nt		2.95	□□□□□ -1.94
RRP3	P38712	RPS21B	YJL136C	264 nt		2.95	□□□□□ -1.94
RRP3	P38712	EAF6	YJR082C	342 nt		2.95	□□□□□ -1.94
RRP3	P38712	YLR224W	YLR224W	1110 nt		2.95	□□□□□ -1.94
RRP3	P38712	AFT2	YPL202C	1251 nt		2.95	□□□□□ -1.94
RRP3	P38712	SEC66	YBR171W	621 nt		2.95	□□□□□ -1.94
RRP3	P38712	MUB1	YMR100W	1863 nt		2.94	□□□□□ -1.94
RRP3	P38712	VAC14	YLR386W	2643 nt		2.94	□□□□□ -1.94
RRP3	P38712	SHE4	YOR035C	2370 nt		2.94	□□□□□ -1.94
RRP3	P38712	SLH1	YGR271W	5904 nt		2.94	□□□□□ -1.94
RRP3	P38712	TIF4631	YGR162W	2859 nt		2.94	□□□□□ -1.94
RRP3	P38712	snR56	snR56	88 nt		2.94	□□□□□ -1.94
RRP3	P38712	AHC2	YCR082W	387 nt		2.94	□□□□□ -1.94
RRP3	P38712	RPL23B	YER117W	414 nt		2.94	□□□□□ -1.94
RRP3	P38712	YGR042W	YGR042W	816 nt		2.94	□□□□□ -1.94
RRP3	P38712	VPS51	YKR020W	495 nt		2.94	□□□□□ -1.94
RRP3	P38712	RPS21A	YKR057W	264 nt		2.94	□□□□□ -1.94
RRP3	P38712	BER1	YLR412W	825 nt		2.94	□□□□□ -1.94
RRP3	P38712	YNL150W	YNL150W	408 nt		2.94	□□□□□ -1.94
RRP3	P38712	PHO80	YOL001W	882 nt		2.94	□□□□□ -1.94
RRP3	P38712	YOL114C	YOL114C	609 nt		2.94	□□□□□ -1.94

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