Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 SED5YLR026C 1023 nt2.13□□□□□ -2.07
CUE1P38428 SAS2YMR127C 1017 nt2.13□□□□□ -2.07
CUE1P38428 MER1YNL210W 813 nt2.13□□□□□ -2.07
CUE1P38428 RPL25YOL127W 429 nt2.13□□□□□ -2.07
CUE1P38428 YEF3YLR249W 3135 nt2.13□□□□□ -2.07
CUE1P38428 AEP1YMR064W 1557 nt2.13□□□□□ -2.07
CUE1P38428 YNL018CYNL018C 1839 nt2.12□□□□□ -2.07
CUE1P38428 SEC26YDR238C 2922 nt2.12□□□□□ -2.07
CUE1P38428 SYO1YDL063C 1863 nt2.12□□□□□ -2.07
CUE1P38428 snR70snR70 164 nt2.12□□□□□ -2.07
CUE1P38428 YMR31YFR049W 372 nt2.12□□□□□ -2.07
CUE1P38428 tW(CCA)G1tW(CCA)G1 72 nt2.12□□□□□ -2.07
CUE1P38428 tW(CCA)G2tW(CCA)G2 72 nt2.12□□□□□ -2.07
CUE1P38428 tW(CCA)JtW(CCA)J 72 nt2.12□□□□□ -2.07
CUE1P38428 tW(CCA)KtW(CCA)K 72 nt2.12□□□□□ -2.07
CUE1P38428 tW(CCA)MtW(CCA)M 72 nt2.12□□□□□ -2.07
CUE1P38428 tW(CCA)PtW(CCA)P 72 nt2.12□□□□□ -2.07
CUE1P38428 RNR2YJL026W 1200 nt2.12□□□□□ -2.07
CUE1P38428 YMR187CYMR187C 1296 nt2.12□□□□□ -2.07
CUE1P38428 CCL1YPR025C 1182 nt2.12□□□□□ -2.07
CUE1P38428 NAB6YML117W 3405 nt2.12□□□□□ -2.07
CUE1P38428 RGA2YDR379W 3030 nt2.12□□□□□ -2.07
CUE1P38428 LSM4YER112W 564 nt2.11□□□□□ -2.07
CUE1P38428 COG7YGL005C 840 nt2.11□□□□□ -2.07
CUE1P38428 MPO1YGL010W 525 nt2.11□□□□□ -2.07
CUE1P38428 RTS3YGR161C 792 nt2.11□□□□□ -2.07
CUE1P38428 YJL202CYJL202C 348 nt2.11□□□□□ -2.07
CUE1P38428 YLR154W-EYLR154W-E 204 nt2.11□□□□□ -2.07
CUE1P38428 YOR055WYOR055W 435 nt2.11□□□□□ -2.07
CUE1P38428 MRPL40YPL173W 894 nt2.11□□□□□ -2.07
CUE1P38428 PTP3YER075C 2787 nt2.11□□□□□ -2.07
CUE1P38428 RPO41YFL036W 4056 nt2.11□□□□□ -2.07
CUE1P38428 TOF1YNL273W 3717 nt2.11□□□□□ -2.07
CUE1P38428 INP51YIL002C 2841 nt2.11□□□□□ -2.07
CUE1P38428 HRD3YLR207W 2502 nt2.11□□□□□ -2.07
CUE1P38428 GIN4YDR507C 3429 nt2.1□□□□□ -2.07
CUE1P38428 YPK1YKL126W 2043 nt2.1□□□□□ -2.07
CUE1P38428 DPP1YDR284C 870 nt2.1□□□□□ -2.07
CUE1P38428 MEI4YER044C-A 1227 nt2.1□□□□□ -2.07
CUE1P38428 YFR032C-BYFR032C-B 264 nt2.1□□□□□ -2.07
CUE1P38428 YHR032W-AYHR032W-A 180 nt2.1□□□□□ -2.07
CUE1P38428 PEX18YHR160C 852 nt2.1□□□□□ -2.07
CUE1P38428 VPH2YKL119C 648 nt2.1□□□□□ -2.07
CUE1P38428 MIC27YNL100W 705 nt2.1□□□□□ -2.07
CUE1P38428 HUA2YOR284W 732 nt2.1□□□□□ -2.07
CUE1P38428 BTS1YPL069C 1008 nt2.1□□□□□ -2.07
CUE1P38428 snR43snR43 209 nt2.1□□□□□ -2.07
CUE1P38428 BI3Q0115 1554 nt2.1□□□□□ -2.07
CUE1P38428 VPS41YDR080W 2979 nt2.1□□□□□ -2.07
CUE1P38428 MRP10YDL045W-A 288 nt2.09□□□□□ -2.07
CUE1P38428 YFH1YDL120W 525 nt2.09□□□□□ -2.07
CUE1P38428 TIM9YEL020W-A 264 nt2.09□□□□□ -2.07
CUE1P38428 VPS25YJR102C 609 nt2.09□□□□□ -2.07
CUE1P38428 YKL131WYKL131W 522 nt2.09□□□□□ -2.07
CUE1P38428 YMR320WYMR320W 306 nt2.09□□□□□ -2.07
CUE1P38428 CRS5YOR031W 210 nt2.09□□□□□ -2.07
CUE1P38428 RPC40YPR110C 1008 nt2.09□□□□□ -2.07
CUE1P38428 NTC20YBR188C 423 nt2.09□□□□□ -2.07
CUE1P38428 ARP8YOR141C 2646 nt2.09□□□□□ -2.08
CUE1P38428 PUF4YGL014W 2667 nt2.09□□□□□ -2.08
CUE1P38428 HOS4YIL112W 3252 nt2.09□□□□□ -2.08
CUE1P38428 YJL049WYJL049W 1353 nt2.09□□□□□ -2.08
CUE1P38428 SVL3YPL032C 2478 nt2.09□□□□□ -2.08
CUE1P38428 ROY1YMR258C 1662 nt2.09□□□□□ -2.08
CUE1P38428 RGL1YPL066W 1440 nt2.08□□□□□ -2.08
CUE1P38428 MAL33YBR297W 1407 nt2.08□□□□□ -2.08
CUE1P38428 SRD1YCR018C 666 nt2.08□□□□□ -2.08
CUE1P38428 UBC13YDR092W 462 nt2.08□□□□□ -2.08
CUE1P38428 PRE1YER012W 597 nt2.08□□□□□ -2.08
CUE1P38428 COG2YGR120C 789 nt2.08□□□□□ -2.08
CUE1P38428 MVB12YGR206W 306 nt2.08□□□□□ -2.08
CUE1P38428 NYV1YLR093C 762 nt2.08□□□□□ -2.08
CUE1P38428 FAR3YMR052W 615 nt2.08□□□□□ -2.08
CUE1P38428 CTL1YMR180C 963 nt2.08□□□□□ -2.08
CUE1P38428 RGM1YMR182C 636 nt2.08□□□□□ -2.08
CUE1P38428 YOL107WYOL107W 1029 nt2.08□□□□□ -2.08
CUE1P38428 RPB8YOR224C 441 nt2.08□□□□□ -2.08
CUE1P38428 RPL36BYPL249C-A 303 nt2.08□□□□□ -2.08
CUE1P38428 CSH1YBR161W 1131 nt2.08□□□□□ -2.08
CUE1P38428 STH1YIL126W 4080 nt2.07□□□□□ -2.08
CUE1P38428 SNX41YDR425W 1878 nt2.07□□□□□ -2.08
CUE1P38428 PDR1YGL013C 3207 nt2.07□□□□□ -2.08
CUE1P38428 YEL1YBL060W 2064 nt2.07□□□□□ -2.08
CUE1P38428 UBC9YDL064W 474 nt2.07□□□□□ -2.08
CUE1P38428 snR76snR76 109 nt2.07□□□□□ -2.08
CUE1P38428 GPI19YDR437W 423 nt2.07□□□□□ -2.08
CUE1P38428 YGR111WYGR111W 1203 nt2.07□□□□□ -2.08
CUE1P38428 YAL037WYAL037W 804 nt2.07□□□□□ -2.08
CUE1P38428 YKL165C-AYKL165C-A 234 nt2.07□□□□□ -2.08
CUE1P38428 BET3YKR068C 582 nt2.07□□□□□ -2.08
CUE1P38428 YNL046WYNL046W 519 nt2.07□□□□□ -2.08
CUE1P38428 YNL089CYNL089C 477 nt2.07□□□□□ -2.08
CUE1P38428 IRC13YOR235W 315 nt2.07□□□□□ -2.08
CUE1P38428 ASI3YNL008C 2031 nt2.07□□□□□ -2.08
CUE1P38428 FUS1YCL027W 1539 nt2.07□□□□□ -2.08
CUE1P38428 FKS3YMR306W 5358 nt2.06□□□□□ -2.08
CUE1P38428 PEX4YGR133W 552 nt2.06□□□□□ -2.08
CUE1P38428 YAL026C-AYAL026C-A 438 nt2.06□□□□□ -2.08
CUE1P38428 PAU8YAL068C 363 nt2.06□□□□□ -2.08
CUE1P38428 MRPL17YNL252C 846 nt2.06□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 185.3 ms