RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C DRS1P32892 752 aaKnown RBP13.3□□□□□ -0.28
VPS25YJR102C MTC1P47018 478 aaKnown RBP13.21□□□□□ -0.29
VPS25YJR102C FAP1P53971 965 aa11.8□□□□□ -0.52
VPS25YJR102C BFR2Q06631 534 aaKnown RBP11.49□□□□□ -0.57
VPS25YJR102C DIP2Q12220 943 aaPredicted RBP11.31□□□□□ -0.6
VPS25YJR102C PRY3P47033 881 aa11.13□□□□□ -0.63
VPS25YJR102C AVT3P36062 692 aa11.08□□□□□ -0.64
VPS25YJR102C ISW2Q08773 1120 aa10.8□□□□□ -0.68
VPS25YJR102C RSE1Q04693 1361 aaKnown RBP10.69□□□□□ -0.7
VPS25YJR102C TFA1P36100 482 aa10.69□□□□□ -0.7
VPS25YJR102C RPG1P38249 964 aaKnown RBP10.66□□□□□ -0.7
VPS25YJR102C AAD16Q02895 342 aa10.65□□□□□ -0.7
VPS25YJR102C PRI1P10363 409 aa10.62□□□□□ -0.71
VPS25YJR102C YCK3P39962 524 aa10.48□□□□□ -0.73
VPS25YJR102C HAA1Q12753 694 aaKnown RBP10.39□□□□□ -0.75
VPS25YJR102C RPL17AP05740 184 aaKnown RBP10.31□□□□□ -0.76
VPS25YJR102C RPL17BP46990 184 aaKnown RBP10.31□□□□□ -0.76
VPS25YJR102C REB1P21538 810 aa10.21□□□□□ -0.77
VPS25YJR102C TSR3Q12094 313 aaKnown RBP10.15□□□□□ -0.78
VPS25YJR102C SPT21P35209 758 aa9.84□□□□□ -0.83
VPS25YJR102C MRPL32P25348 183 aa9.75□□□□□ -0.85
VPS25YJR102C RIM101P33400 625 aa9.69□□□□□ -0.86
VPS25YJR102C YKR023WP36119 530 aaKnown RBP9.55□□□□□ -0.88
VPS25YJR102C PTP3P40048 928 aa9.46□□□□□ -0.9
VPS25YJR102C YGL015CP33199 130 aa9.45□□□□□ -0.9
VPS25YJR102C HOP09932 586 aa9.42□□□□□ -0.9
VPS25YJR102C OXP1P28273 1286 aa9.41□□□□□ -0.9
VPS25YJR102C CDC27P38042 758 aa9.38□□□□□ -0.91
VPS25YJR102C YAH1Q12184 172 aaKnown RBP9.38□□□□□ -0.91
VPS25YJR102C YIL055CP40523 627 aaKnown RBP9.37□□□□□ -0.91
VPS25YJR102C DCD1P06773 312 aa9.36□□□□□ -0.91
VPS25YJR102C TFC8Q12308 588 aa9.36□□□□□ -0.91
VPS25YJR102C SSP1P38871 571 aa9.29□□□□□ -0.92
VPS25YJR102C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
VPS25YJR102C RSM7P47150 247 aa9.16□□□□□ -0.94
VPS25YJR102C YLR271WQ06152 274 aa9.16□□□□□ -0.94
VPS25YJR102C BCH2P36122 765 aa9.1□□□□□ -0.95
VPS25YJR102C RQC2Q12532 1038 aaKnown RBP9.09□□□□□ -0.95
VPS25YJR102C BUD31P25337 157 aaPredicted RBP9.06□□□□□ -0.96
VPS25YJR102C AI2P03876 854 aa9.02□□□□□ -0.97
VPS25YJR102C MAP2P38174 421 aaKnown RBP9.01□□□□□ -0.97
VPS25YJR102C SCY1P53009 804 aa9.01□□□□□ -0.97
VPS25YJR102C BBC1P47068 1157 aa9□□□□□ -0.97
VPS25YJR102C UBP10P53874 792 aaPredicted RBP8.98□□□□□ -0.97
VPS25YJR102C EPS1P40557 701 aa8.96□□□□□ -0.98
VPS25YJR102C MGA2P40578 1113 aa8.96□□□□□ -0.98
VPS25YJR102C PSD2P53037 1138 aaKnown RBP8.9□□□□□ -0.98
VPS25YJR102C CST9Q06032 482 aa8.9□□□□□ -0.98
VPS25YJR102C BDF1P35817 686 aa8.88□□□□□ -0.99
VPS25YJR102C DMA1P38823 416 aa8.85□□□□□ -0.99
VPS25YJR102C SLX5P32828 619 aaKnown RBP8.83□□□□□ -1
VPS25YJR102C MRM1P25270 412 aa8.76□□□□□ -1.01
VPS25YJR102C TIF4632P39936 914 aaKnown RBP8.66□□□□□ -1.02
VPS25YJR102C RTG3P38165 486 aa8.62□□□□□ -1.03
VPS25YJR102C RCR1P38212 213 aa8.59□□□□□ -1.03
VPS25YJR102C SIS1P25294 352 aaKnown RBP8.54□□□□□ -1.04
VPS25YJR102C RAM2P29703 316 aa8.54□□□□□ -1.04
VPS25YJR102C TGL3P40308 642 aa8.54□□□□□ -1.04
VPS25YJR102C VPS29P38759 282 aa8.48□□□□□ -1.05
VPS25YJR102C UBP9P39967 754 aa8.45□□□□□ -1.06
VPS25YJR102C YMR1P47147 688 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
VPS25YJR102C YAP5P40574 245 aa8.43□□□□□ -1.06
VPS25YJR102C YOR238WQ08634 303 aa8.43□□□□□ -1.06
VPS25YJR102C MAK11P20484 414 aaKnown RBP8.42□□□□□ -1.06
VPS25YJR102C YFR006WP43590 535 aa8.42□□□□□ -1.06
VPS25YJR102C PIB1Q06651 286 aa8.41□□□□□ -1.06
VPS25YJR102C DBP1P24784 617 aaKnown RBP8.4□□□□□ -1.06
VPS25YJR102C STS1P38637 319 aa8.39□□□□□ -1.07
VPS25YJR102C NSR1P27476 414 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
VPS25YJR102C SET1P38827 1080 aaKnown RBP8.38□□□□□ -1.07
VPS25YJR102C MIF2P35201 549 aa8.33□□□□□ -1.08
VPS25YJR102C COQ8P27697 501 aa8.32□□□□□ -1.08
VPS25YJR102C SAS10Q12136 610 aaPredicted RBP8.28□□□□□ -1.08
VPS25YJR102C GTT3P39996 337 aa8.27□□□□□ -1.09
VPS25YJR102C VMA1P17255 1071 aaKnown RBP8.23□□□□□ -1.09
VPS25YJR102C EDS1P38073 919 aa8.23□□□□□ -1.09
VPS25YJR102C MST1P07236 462 aa8.22□□□□□ -1.09
VPS25YJR102C IFH1P39520 1085 aa8.22□□□□□ -1.09
VPS25YJR102C VPS70P47161 811 aa8.22□□□□□ -1.09
VPS25YJR102C PTC3P34221 468 aaKnown RBP8.18□□□□□ -1.1
VPS25YJR102C YPR148CQ06523 435 aa8.17□□□□□ -1.1
VPS25YJR102C NOP53Q12080 455 aaKnown RBP8.16□□□□□ -1.1
VPS25YJR102C WSC3Q12215 556 aa8.14□□□□□ -1.11
VPS25YJR102C ATH1P48016 1211 aa8.12□□□□□ -1.11
VPS25YJR102C GRE2Q12068 342 aaKnown RBP8.12□□□□□ -1.11
VPS25YJR102C CKB1P43639 278 aa8.11□□□□□ -1.11
VPS25YJR102C SPB4P25808 606 aaPredicted RBP8.1□□□□□ -1.11
VPS25YJR102C SAM3Q08986 587 aa8.1□□□□□ -1.11
VPS25YJR102C GYP5Q12344 894 aa8.1□□□□□ -1.11
VPS25YJR102C SET4P42948 560 aa8.09□□□□□ -1.11
VPS25YJR102C YOL036WQ08206 761 aa8.09□□□□□ -1.11
VPS25YJR102C YBL029C-AQ3E756 94 aa8.07□□□□□ -1.12
VPS25YJR102C GUT1P32190 709 aa8.05□□□□□ -1.12
VPS25YJR102C DCW1P36091 449 aa8.04□□□□□ -1.12
VPS25YJR102C REF2P42073 533 aaPredicted RBP8.01□□□□□ -1.13
VPS25YJR102C MSB4Q12317 492 aa8.01□□□□□ -1.13
VPS25YJR102C PBS2P08018 668 aa8□□□□□ -1.13
VPS25YJR102C LEU3P08638 886 aa8□□□□□ -1.13
VPS25YJR102C ABP1P15891 592 aaKnown RBP8□□□□□ -1.13
VPS25YJR102C HTA1P04911 132 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms