Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 HSP10YOR020C 321 nt2.23□□□□□ -2.05
SSH1P38353 CBP6YBR120C 489 nt2.23□□□□□ -2.05
SSH1P38353 ARP8YOR141C 2646 nt2.23□□□□□ -2.05
SSH1P38353 FIR1YER032W 2631 nt2.22□□□□□ -2.05
SSH1P38353 NMA111YNL123W 2994 nt2.22□□□□□ -2.05
SSH1P38353 NOP56YLR197W 1515 nt2.22□□□□□ -2.05
SSH1P38353 YLR446WYLR446W 1302 nt2.22□□□□□ -2.05
SSH1P38353 VPS64YDR200C 1815 nt2.22□□□□□ -2.05
SSH1P38353 MLH1YMR167W 2310 nt2.22□□□□□ -2.05
SSH1P38353 YDR061WYDR061W 1620 nt2.22□□□□□ -2.05
SSH1P38353 YCR016WYCR016W 873 nt2.22□□□□□ -2.05
SSH1P38353 SEC4YFL005W 648 nt2.22□□□□□ -2.05
SSH1P38353 COG2YGR120C 789 nt2.22□□□□□ -2.05
SSH1P38353 DSE2YHR143W 978 nt2.22□□□□□ -2.05
SSH1P38353 RPS1AYLR441C 768 nt2.22□□□□□ -2.05
SSH1P38353 SRT1YMR101C 1032 nt2.22□□□□□ -2.05
SSH1P38353 PEX17YNL214W 600 nt2.22□□□□□ -2.05
SSH1P38353 MRPL17YNL252C 846 nt2.22□□□□□ -2.05
SSH1P38353 YBR013CYBR013C 390 nt2.22□□□□□ -2.05
SSH1P38353 RPS12YOR369C 432 nt2.22□□□□□ -2.05
SSH1P38353 SEN54YPL083C 1404 nt2.22□□□□□ -2.05
SSH1P38353 BI3Q0115 1554 nt2.22□□□□□ -2.05
SSH1P38353 MDM36YPR083W 1740 nt2.22□□□□□ -2.05
SSH1P38353 SWA2YDR320C 2007 nt2.22□□□□□ -2.05
SSH1P38353 YDR170W-AYDR170W-A 1323 nt2.21□□□□□ -2.06
SSH1P38353 YBL005W-AYBL005W-A 1323 nt2.21□□□□□ -2.06
SSH1P38353 YMR046CYMR046C 1323 nt2.21□□□□□ -2.06
SSH1P38353 YNL284C-AYNL284C-A 1323 nt2.21□□□□□ -2.06
SSH1P38353 FKS3YMR306W 5358 nt2.21□□□□□ -2.06
SSH1P38353 HBT1YDL223C 3141 nt2.21□□□□□ -2.06
SSH1P38353 YDR261W-BYDR261W-B 5313 nt2.21□□□□□ -2.06
SSH1P38353 SEM1YDR363W-A 270 nt2.21□□□□□ -2.06
SSH1P38353 YFL002W-AYFL002W-A 5313 nt2.21□□□□□ -2.06
SSH1P38353 PDR1YGL013C 3207 nt2.21□□□□□ -2.06
SSH1P38353 YGR161W-BYGR161W-B 5313 nt2.21□□□□□ -2.06
SSH1P38353 RNR2YJL026W 1200 nt2.21□□□□□ -2.06
SSH1P38353 MBB1YJL199C 327 nt2.21□□□□□ -2.06
SSH1P38353 YML090WYML090W 387 nt2.21□□□□□ -2.06
SSH1P38353 YBL055CYBL055C 1257 nt2.21□□□□□ -2.06
SSH1P38353 BOI1YBL085W 2943 nt2.21□□□□□ -2.06
SSH1P38353 YOR331CYOR331C 558 nt2.21□□□□□ -2.06
SSH1P38353 YCL019WYCL019W 5313 nt2.21□□□□□ -2.06
SSH1P38353 CSF1YLR087C 8877 nt2.21□□□□□ -2.06
SSH1P38353 YOL057WYOL057W 2136 nt2.21□□□□□ -2.06
SSH1P38353 TOF1YNL273W 3717 nt2.21□□□□□ -2.06
SSH1P38353 UTP15YMR093W 1542 nt2.21□□□□□ -2.06
SSH1P38353 EDS1YBR033W 2760 nt2.2□□□□□ -2.06
SSH1P38353 YJL181WYJL181W 1836 nt2.2□□□□□ -2.06
SSH1P38353 UBC9YDL064W 474 nt2.2□□□□□ -2.06
SSH1P38353 RSM24YDR175C 960 nt2.2□□□□□ -2.06
SSH1P38353 TIM11YDR322C-A 291 nt2.2□□□□□ -2.06
SSH1P38353 YFR054CYFR054C 579 nt2.2□□□□□ -2.06
SSH1P38353 PSF2YJL072C 642 nt2.2□□□□□ -2.06
SSH1P38353 YAL031W-AYAL031W-A 309 nt2.2□□□□□ -2.06
SSH1P38353 YKL165C-AYKL165C-A 234 nt2.2□□□□□ -2.06
SSH1P38353 JID1YPR061C 906 nt2.2□□□□□ -2.06
SSH1P38353 snR44snR44 211 nt2.2□□□□□ -2.06
SSH1P38353 MAK5YBR142W 2322 nt2.2□□□□□ -2.06
SSH1P38353 NOP12YOL041C 1380 nt2.2□□□□□ -2.06
SSH1P38353 YNL193WYNL193W 1677 nt2.19□□□□□ -2.06
SSH1P38353 DBF20YPR111W 1695 nt2.19□□□□□ -2.06
SSH1P38353 DPP1YDR284C 870 nt2.19□□□□□ -2.06
SSH1P38353 YEL010WYEL010W 351 nt2.19□□□□□ -2.06
SSH1P38353 YGL177WYGL177W 348 nt2.19□□□□□ -2.06
SSH1P38353 YHR213WYHR213W 597 nt2.19□□□□□ -2.06
SSH1P38353 GPI14YJR013W 1212 nt2.19□□□□□ -2.06
SSH1P38353 YAR062WYAR062W 597 nt2.19□□□□□ -2.06
SSH1P38353 ARC18YLR370C 537 nt2.19□□□□□ -2.06
SSH1P38353 YMR306C-AYMR306C-A 390 nt2.19□□□□□ -2.06
SSH1P38353 YOR055WYOR055W 435 nt2.19□□□□□ -2.06
SSH1P38353 UFE1YOR075W 1041 nt2.19□□□□□ -2.06
SSH1P38353 RPB8YOR224C 441 nt2.19□□□□□ -2.06
SSH1P38353 TYE7YOR344C 876 nt2.19□□□□□ -2.06
SSH1P38353 YPL276WYPL276W 438 nt2.19□□□□□ -2.06
SSH1P38353 NEL1YHR035W 1893 nt2.19□□□□□ -2.06
SSH1P38353 NEW1YPL226W 3591 nt2.19□□□□□ -2.06
SSH1P38353 CDC5YMR001C 2118 nt2.18□□□□□ -2.06
SSH1P38353 YPD1YDL235C 504 nt2.18□□□□□ -2.06
SSH1P38353 GIC2YDR309C 1152 nt2.18□□□□□ -2.06
SSH1P38353 COG7YGL005C 840 nt2.18□□□□□ -2.06
SSH1P38353 MPC1YGL080W 393 nt2.18□□□□□ -2.06
SSH1P38353 tW(CCA)G1tW(CCA)G1 72 nt2.18□□□□□ -2.06
SSH1P38353 tW(CCA)G2tW(CCA)G2 72 nt2.18□□□□□ -2.06
SSH1P38353 tW(CCA)JtW(CCA)J 72 nt2.18□□□□□ -2.06
SSH1P38353 tW(CCA)KtW(CCA)K 72 nt2.18□□□□□ -2.06
SSH1P38353 tW(CCA)MtW(CCA)M 72 nt2.18□□□□□ -2.06
SSH1P38353 tW(CCA)PtW(CCA)P 72 nt2.18□□□□□ -2.06
SSH1P38353 YLR154W-EYLR154W-E 204 nt2.18□□□□□ -2.06
SSH1P38353 MST28YAR033W 705 nt2.18□□□□□ -2.06
SSH1P38353 YNL046WYNL046W 519 nt2.18□□□□□ -2.06
SSH1P38353 RRG8YPR116W 834 nt2.18□□□□□ -2.06
SSH1P38353 JIP5YPR169W 1479 nt2.18□□□□□ -2.06
SSH1P38353 PDS5YMR076C 3834 nt2.18□□□□□ -2.06
SSH1P38353 YDR186CYDR186C 2634 nt2.18□□□□□ -2.06
SSH1P38353 GCV2YMR189W 3105 nt2.17□□□□□ -2.06
SSH1P38353 PTP3YER075C 2787 nt2.17□□□□□ -2.06
SSH1P38353 SWR1YDR334W 4545 nt2.17□□□□□ -2.06
SSH1P38353 YGL117WYGL117W 798 nt2.17□□□□□ -2.06
SSH1P38353 SAE2YGL175C 1038 nt2.17□□□□□ -2.06
SSH1P38353 YGL204CYGL204C 306 nt2.17□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms