Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 ASG7YJL170C 630 nt3.06□□□□□ -1.92
SEF1P34228 RPL17BYJL177W 555 nt3.06□□□□□ -1.92
SEF1P34228 YKL075CYKL075C 1353 nt3.06□□□□□ -1.92
SEF1P34228 EAP1YKL204W 1899 nt3.06□□□□□ -1.92
SEF1P34228 SHH3YMR118C 591 nt3.06□□□□□ -1.92
SEF1P34228 ASI3YNL008C 2031 nt3.06□□□□□ -1.92
SEF1P34228 YBL065WYBL065W 345 nt3.06□□□□□ -1.92
SEF1P34228 RPL16BYNL069C 597 nt3.06□□□□□ -1.92
SEF1P34228 YNL235CYNL235C 432 nt3.06□□□□□ -1.92
SEF1P34228 MIX23YBL107C 591 nt3.06□□□□□ -1.92
SEF1P34228 STI1YOR027W 1770 nt3.06□□□□□ -1.92
SEF1P34228 DSF2YBR007C 2211 nt3.06□□□□□ -1.92
SEF1P34228 NOP4YPL043W 2058 nt3.06□□□□□ -1.92
SEF1P34228 YPR170CYPR170C 336 nt3.06□□□□□ -1.92
SEF1P34228 EXO5YBR163W 1758 nt3.06□□□□□ -1.92
SEF1P34228 TAF2YCR042C 4224 nt3.06□□□□□ -1.92
SEF1P34228 URB2YJR041C 3525 nt3.06□□□□□ -1.92
SEF1P34228 EXO84YBR102C 2262 nt3.05□□□□□ -1.92
SEF1P34228 DIA2YOR080W 2199 nt3.05□□□□□ -1.92
SEF1P34228 STP2YHR006W 1626 nt3.05□□□□□ -1.92
SEF1P34228 STN1YDR082W 1485 nt3.05□□□□□ -1.92
SEF1P34228 OCA6YDR067C 675 nt3.05□□□□□ -1.92
SEF1P34228 YDR461C-AYDR461C-A 243 nt3.05□□□□□ -1.92
SEF1P34228 tK(UUU)DtK(UUU)D 73 nt3.05□□□□□ -1.92
SEF1P34228 tK(UUU)G1tK(UUU)G1 73 nt3.05□□□□□ -1.92
SEF1P34228 tK(UUU)G2tK(UUU)G2 73 nt3.05□□□□□ -1.92
SEF1P34228 tK(UUU)KtK(UUU)K 73 nt3.05□□□□□ -1.92
SEF1P34228 tK(UUU)LtK(UUU)L 73 nt3.05□□□□□ -1.92
SEF1P34228 tK(UUU)OtK(UUU)O 73 nt3.05□□□□□ -1.92
SEF1P34228 tK(UUU)PtK(UUU)P 73 nt3.05□□□□□ -1.92
SEF1P34228 MIC19YFR011C 513 nt3.05□□□□□ -1.92
SEF1P34228 COG2YGR120C 789 nt3.05□□□□□ -1.92
SEF1P34228 RPL27AYHR010W 411 nt3.05□□□□□ -1.92
SEF1P34228 PPX1YHR201C 1194 nt3.05□□□□□ -1.92
SEF1P34228 SFT1YKL006C-A 294 nt3.05□□□□□ -1.92
SEF1P34228 YLR257WYLR257W 966 nt3.05□□□□□ -1.92
SEF1P34228 IRC21YMR073C 606 nt3.05□□□□□ -1.92
SEF1P34228 YMR316C-AYMR316C-A 312 nt3.05□□□□□ -1.92
SEF1P34228 MRPL40YPL173W 894 nt3.05□□□□□ -1.92
SEF1P34228 MUD1YBR119W 897 nt3.05□□□□□ -1.92
SEF1P34228 SEC66YBR171W 621 nt3.05□□□□□ -1.92
SEF1P34228 BCH1YMR237W 2175 nt3.05□□□□□ -1.92
SEF1P34228 VHR1YIL056W 1923 nt3.05□□□□□ -1.92
SEF1P34228 HOP1YIL072W 1818 nt3.05□□□□□ -1.92
SEF1P34228 VAS1YGR094W 3315 nt3.04□□□□□ -1.92
SEF1P34228 KHA1YJL094C 2622 nt3.04□□□□□ -1.92
SEF1P34228 CKA1YIL035C 1119 nt3.04□□□□□ -1.92
SEF1P34228 COA4YLR218C 453 nt3.04□□□□□ -1.92
SEF1P34228 VPS63YLR261C 327 nt3.04□□□□□ -1.92
SEF1P34228 YPL107WYPL107W 747 nt3.04□□□□□ -1.92
SEF1P34228 YPR108W-AYPR108W-A 213 nt3.04□□□□□ -1.92
SEF1P34228 NTC20YBR188C 423 nt3.04□□□□□ -1.92
SEF1P34228 EPL1YFL024C 2499 nt3.04□□□□□ -1.92
SEF1P34228 YDL180WYDL180W 1644 nt3.04□□□□□ -1.92
SEF1P34228 TRS120YDR407C 3870 nt3.03□□□□□ -1.92
SEF1P34228 SNA4YDL123W 423 nt3.03□□□□□ -1.92
SEF1P34228 RPS21BYJL136C 264 nt3.03□□□□□ -1.92
SEF1P34228 LSM8YJR022W 330 nt3.03□□□□□ -1.92
SEF1P34228 YLR012CYLR012C 300 nt3.03□□□□□ -1.92
SEF1P34228 AFT2YPL202C 1251 nt3.03□□□□□ -1.92
SEF1P34228 SPO71YDR104C 3738 nt3.03□□□□□ -1.92
SEF1P34228 YDR034C-DYDR034C-D 5313 nt3.03□□□□□ -1.92
SEF1P34228 MSH4YFL003C 2637 nt3.03□□□□□ -1.93
SEF1P34228 ROM1YGR070W 3468 nt3.02□□□□□ -1.93
SEF1P34228 UBX3YDL091C 1368 nt3.02□□□□□ -1.93
SEF1P34228 GIS4YML006C 2325 nt3.02□□□□□ -1.93
SEF1P34228 FAP7YDL166C 594 nt3.02□□□□□ -1.93
SEF1P34228 MRH1YDR033W 963 nt3.02□□□□□ -1.93
SEF1P34228 YJR087WYJR087W 351 nt3.02□□□□□ -1.93
SEF1P34228 SRP21YKL122C 504 nt3.02□□□□□ -1.93
SEF1P34228 TDA8YAL064C-A 381 nt3.02□□□□□ -1.93
SEF1P34228 YBR051WYBR051W 351 nt3.02□□□□□ -1.93
SEF1P34228 SWD3YBR175W 948 nt3.02□□□□□ -1.93
SEF1P34228 RCY1YJL204C 2523 nt3.02□□□□□ -1.93
SEF1P34228 RIF1YBR275C 5751 nt3.02□□□□□ -1.93
SEF1P34228 ADY4YLR227C 1482 nt3.02□□□□□ -1.93
SEF1P34228 YJL132WYJL132W 2253 nt3.02□□□□□ -1.93
SEF1P34228 MFB1YDR219C 1398 nt3.01□□□□□ -1.93
SEF1P34228 NUP60YAR002W 1620 nt3.01□□□□□ -1.93
SEF1P34228 DUF1YOL087C 3351 nt3.01□□□□□ -1.93
SEF1P34228 MAK21YDR060W 3078 nt3.01□□□□□ -1.93
SEF1P34228 snR5snR5 204 nt3.01□□□□□ -1.93
SEF1P34228 DAD1YDR016C 285 nt3.01□□□□□ -1.93
SEF1P34228 VMA8YEL051W 771 nt3.01□□□□□ -1.93
SEF1P34228 COX23YHR116W 456 nt3.01□□□□□ -1.93
SEF1P34228 MRPL38YKL170W 417 nt3.01□□□□□ -1.93
SEF1P34228 RAD33YML011C 534 nt3.01□□□□□ -1.93
SEF1P34228 MRPL16YBL038W 699 nt3.01□□□□□ -1.93
SEF1P34228 YBR300CYBR300C 498 nt3.01□□□□□ -1.93
SEF1P34228 RIX1YHR197W 2292 nt3.01□□□□□ -1.93
SEF1P34228 SHS1YDL225W 1656 nt3.01□□□□□ -1.93
SEF1P34228 YMR317WYMR317W 3423 nt3□□□□□ -1.93
SEF1P34228 MED1YPR070W 1701 nt3□□□□□ -1.93
SEF1P34228 snR9snR9 187 nt3□□□□□ -1.93
SEF1P34228 PSF1YDR013W 627 nt3□□□□□ -1.93
SEF1P34228 VMA21YGR105W 234 nt3□□□□□ -1.93
SEF1P34228 YHR213WYHR213W 597 nt3□□□□□ -1.93
SEF1P34228 YHR214C-DYHR214C-D 294 nt3□□□□□ -1.93
SEF1P34228 YAR062WYAR062W 597 nt3□□□□□ -1.93
SEF1P34228 YAR069CYAR069C 294 nt3□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms