Protein–RNA interactions for Protein: O14618

CCS, Copper chaperone for superoxide dismutase, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSO14618 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CCSO14618 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCSO14618 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCSO14618 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.34■□□□□ 0.37
CCSO14618 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCSO14618 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSO14618 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCSO14618 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCSO14618 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCSO14618 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CCSO14618 AC098818.2-201ENST00000564925 2320 ntBASIC17.33■□□□□ 0.37
CCSO14618 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSO14618 AL512408.1-201ENST00000569378 2000 ntBASIC17.33■□□□□ 0.37
CCSO14618 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSO14618 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CCSO14618 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.33■□□□□ 0.37
CCSO14618 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSO14618 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCSO14618 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.33■□□□□ 0.36
CCSO14618 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.33■□□□□ 0.36
CCSO14618 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.33■□□□□ 0.36
CCSO14618 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.33■□□□□ 0.36
CCSO14618 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCSO14618 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.33■□□□□ 0.36
CCSO14618 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CCSO14618 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.33■□□□□ 0.36
CCSO14618 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCSO14618 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.33■□□□□ 0.36
CCSO14618 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCSO14618 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 AC018445.3-201ENST00000624177 1945 ntBASIC17.32■□□□□ 0.36
CCSO14618 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.32■□□□□ 0.36
CCSO14618 MIR6722-201ENST00000617286 78 ntBASIC17.32■□□□□ 0.36
CCSO14618 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 AC003102.1-202ENST00000563394 1796 ntBASIC17.32■□□□□ 0.36
CCSO14618 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.32■□□□□ 0.36
CCSO14618 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCSO14618 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCSO14618 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
CCSO14618 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCSO14618 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCSO14618 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.31■□□□□ 0.36
CCSO14618 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCSO14618 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CCSO14618 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCSO14618 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.3■□□□□ 0.36
CCSO14618 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSO14618 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 AC116562.4-201ENST00000641316 2276 ntBASIC17.3■□□□□ 0.36
CCSO14618 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.3■□□□□ 0.36
CCSO14618 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.3■□□□□ 0.36
CCSO14618 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.3■□□□□ 0.36
CCSO14618 AL499627.2-201ENST00000606283 725 ntBASIC17.3■□□□□ 0.36
CCSO14618 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCSO14618 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCSO14618 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCSO14618 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.29■□□□□ 0.36
CCSO14618 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCSO14618 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms