Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YDL183CYDL183C 963 nt2.18□□□□□ -2.06
TY1B-HO13535 ATP17YDR377W 306 nt2.18□□□□□ -2.06
TY1B-HO13535 PEX21YGR239C 867 nt2.18□□□□□ -2.06
TY1B-HO13535 YIR014WYIR014W 729 nt2.18□□□□□ -2.06
TY1B-HO13535 YGR117CYGR117C 1431 nt2.18□□□□□ -2.06
TY1B-HO13535 SOK1YDR006C 2706 nt2.18□□□□□ -2.06
TY1B-HO13535 CTM1YHR109W 1758 nt2.18□□□□□ -2.06
TY1B-HO13535 VMA9YCL005W-A 222 nt2.18□□□□□ -2.06
TY1B-HO13535 MAD3YJL013C 1548 nt2.17□□□□□ -2.06
TY1B-HO13535 MNT3YIL014W 1893 nt2.17□□□□□ -2.06
TY1B-HO13535 OST1YJL002C 1431 nt2.17□□□□□ -2.06
TY1B-HO13535 PCK1YKR097W 1650 nt2.17□□□□□ -2.06
TY1B-HO13535 YIL086CYIL086C 309 nt2.17□□□□□ -2.06
TY1B-HO13535 SYC1YOR179C 567 nt2.17□□□□□ -2.06
TY1B-HO13535 SPO75YLL005C 2607 nt2.17□□□□□ -2.06
TY1B-HO13535 FIG4YNL325C 2640 nt2.16□□□□□ -2.06
TY1B-HO13535 SCL1YGL011C 759 nt2.16□□□□□ -2.06
TY1B-HO13535 SPH1YLR313C 1593 nt2.16□□□□□ -2.06
TY1B-HO13535 MCD1YDL003W 1701 nt2.16□□□□□ -2.06
TY1B-HO13535 CDC10YCR002C 969 nt2.15□□□□□ -2.06
TY1B-HO13535 PKR1YMR123W 369 nt2.15□□□□□ -2.06
TY1B-HO13535 YNL035CYNL035C 1170 nt2.15□□□□□ -2.06
TY1B-HO13535 VHR1YIL056W 1923 nt2.15□□□□□ -2.07
TY1B-HO13535 YPR089WYPR089W 2667 nt2.15□□□□□ -2.07
TY1B-HO13535 ELG1YOR144C 2376 nt2.15□□□□□ -2.07
TY1B-HO13535 RLI1YDR091C 1827 nt2.15□□□□□ -2.07
TY1B-HO13535 YFL002W-AYFL002W-A 5313 nt2.14□□□□□ -2.07
TY1B-HO13535 YGR161W-BYGR161W-B 5313 nt2.14□□□□□ -2.07
TY1B-HO13535 YLR410W-BYLR410W-B 5313 nt2.14□□□□□ -2.07
TY1B-HO13535 YCL019WYCL019W 5313 nt2.14□□□□□ -2.07
TY1B-HO13535 YHR071C-AYHR071C-A 321 nt2.14□□□□□ -2.07
TY1B-HO13535 UPS2YLR168C 693 nt2.14□□□□□ -2.07
TY1B-HO13535 YVC1YOR087W 2028 nt2.14□□□□□ -2.07
TY1B-HO13535 NEL1YHR035W 1893 nt2.13□□□□□ -2.07
TY1B-HO13535 RPS25AYGR027C 327 nt2.13□□□□□ -2.07
TY1B-HO13535 TPM2YIL138C 486 nt2.13□□□□□ -2.07
TY1B-HO13535 INP1YMR204C 1263 nt2.13□□□□□ -2.07
TY1B-HO13535 YPR097WYPR097W 3222 nt2.13□□□□□ -2.07
TY1B-HO13535 APM1YPL259C 1428 nt2.13□□□□□ -2.07
TY1B-HO13535 MRP10YDL045W-A 288 nt2.13□□□□□ -2.07
TY1B-HO13535 COG2YGR120C 789 nt2.13□□□□□ -2.07
TY1B-HO13535 MCM21YDR318W 1107 nt2.12□□□□□ -2.07
TY1B-HO13535 PML1YLR016C 615 nt2.12□□□□□ -2.07
TY1B-HO13535 YLR076CYLR076C 423 nt2.12□□□□□ -2.07
TY1B-HO13535 YNL235CYNL235C 432 nt2.12□□□□□ -2.07
TY1B-HO13535 NPL4YBR170C 1743 nt2.11□□□□□ -2.07
TY1B-HO13535 YIR043CYIR043C 693 nt2.11□□□□□ -2.07
TY1B-HO13535 YKR047WYKR047W 306 nt2.11□□□□□ -2.07
TY1B-HO13535 TRM112YNR046W 408 nt2.11□□□□□ -2.07
TY1B-HO13535 RGA2YDR379W 3030 nt2.11□□□□□ -2.07
TY1B-HO13535 YCK2YNL154C 1641 nt2.11□□□□□ -2.07
TY1B-HO13535 NUP157YER105C 4176 nt2.11□□□□□ -2.07
TY1B-HO13535 RPC11YDR045C 333 nt2.1□□□□□ -2.07
TY1B-HO13535 YER121WYER121W 345 nt2.1□□□□□ -2.07
TY1B-HO13535 YKL071WYKL071W 771 nt2.1□□□□□ -2.07
TY1B-HO13535 YMR247W-AYMR247W-A 144 nt2.1□□□□□ -2.07
TY1B-HO13535 YLR422WYLR422W 5799 nt2.1□□□□□ -2.07
TY1B-HO13535 USO1YDL058W 5373 nt2.1□□□□□ -2.07
TY1B-HO13535 YCR099CYCR099C 468 nt2.1□□□□□ -2.07
TY1B-HO13535 RNR4YGR180C 1038 nt2.1□□□□□ -2.07
TY1B-HO13535 YOR289WYOR289W 756 nt2.1□□□□□ -2.07
TY1B-HO13535 AGE1YDR524C 1449 nt2.1□□□□□ -2.07
TY1B-HO13535 YGR160WYGR160W 612 nt2.09□□□□□ -2.07
TY1B-HO13535 CTK2YJL006C 972 nt2.09□□□□□ -2.07
TY1B-HO13535 YJL211CYJL211C 444 nt2.09□□□□□ -2.07
TY1B-HO13535 YKL165C-AYKL165C-A 234 nt2.09□□□□□ -2.07
TY1B-HO13535 HOS4YIL112W 3252 nt2.08□□□□□ -2.08
TY1B-HO13535 IME1YJR094C 1083 nt2.08□□□□□ -2.08
TY1B-HO13535 RPS29AYLR388W 171 nt2.08□□□□□ -2.08
TY1B-HO13535 YOR032W-AYOR032W-A 201 nt2.08□□□□□ -2.08
TY1B-HO13535 MTL1YGR023W 1656 nt2.08□□□□□ -2.08
TY1B-HO13535 YDR034C-DYDR034C-D 5313 nt2.08□□□□□ -2.08
TY1B-HO13535 RPS29BYDL061C 171 nt2.08□□□□□ -2.08
TY1B-HO13535 TGL2YDR058C 981 nt2.08□□□□□ -2.08
TY1B-HO13535 ISF1YMR081C 1017 nt2.08□□□□□ -2.08
TY1B-HO13535 YLR035C-AYLR035C-A 3468 nt2.07□□□□□ -2.08
TY1B-HO13535 SYH1YPL105C 2550 nt2.07□□□□□ -2.08
TY1B-HO13535 DOP1YDR141C 5097 nt2.07□□□□□ -2.08
TY1B-HO13535 ART10YLR392C 1557 nt2.07□□□□□ -2.08
TY1B-HO13535 CGR1YGL029W 363 nt2.07□□□□□ -2.08
TY1B-HO13535 ALB1YJL122W 528 nt2.07□□□□□ -2.08
TY1B-HO13535 HRI1YLR301W 735 nt2.07□□□□□ -2.08
TY1B-HO13535 SUB1YMR039C 879 nt2.07□□□□□ -2.08
TY1B-HO13535 YHR214C-BYHR214C-B 5382 nt2.07□□□□□ -2.08
TY1B-HO13535 FIR1YER032W 2631 nt2.07□□□□□ -2.08
TY1B-HO13535 PEX5YDR244W 1839 nt2.06□□□□□ -2.08
TY1B-HO13535 PEX14YGL153W 1026 nt2.06□□□□□ -2.08
TY1B-HO13535 SEC3YER008C 4011 nt2.05□□□□□ -2.08
TY1B-HO13535 RRP8YDR083W 1179 nt2.05□□□□□ -2.08
TY1B-HO13535 YGR039WYGR039W 312 nt2.05□□□□□ -2.08
TY1B-HO13535 YBL073WYBL073W 312 nt2.05□□□□□ -2.08
TY1B-HO13535 YGR109W-BYGR109W-B 4644 nt2.05□□□□□ -2.08
TY1B-HO13535 VPS54YDR027C 2670 nt2.05□□□□□ -2.08
TY1B-HO13535 YKL100CYKL100C 1764 nt2.05□□□□□ -2.08
TY1B-HO13535 RIC1YLR039C 3171 nt2.05□□□□□ -2.08
TY1B-HO13535 SNL1YIL016W 480 nt2.05□□□□□ -2.08
TY1B-HO13535 UBX3YDL091C 1368 nt2.04□□□□□ -2.08
TY1B-HO13535 EFG1YGR271C-A 702 nt2.04□□□□□ -2.08
TY1B-HO13535 YIL142C-AYIL142C-A 333 nt2.04□□□□□ -2.08
TY1B-HO13535 ERG29YMR134W 714 nt2.04□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 58.2 ms