Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 AL136116.3-201ENST00000402907 1138 ntBASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 AC099791.2-201ENST00000605725 427 ntBASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-6A0A0B4J262 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-6A0A0B4J262 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV8-6A0A0B4J262 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV8-6A0A0B4J262 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-6A0A0B4J262 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-6A0A0B4J262 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-6A0A0B4J262 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV8-6A0A0B4J262 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 AC131281.2-201ENST00000520478 145 ntBASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 AL512631.2-201ENST00000604634 923 ntBASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV8-6A0A0B4J262 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV8-6A0A0B4J262 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 SYT6-210ENST00000641643 1587 ntBASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 RASSF1-AS1-201ENST00000629828 790 ntBASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV8-6A0A0B4J262 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms