Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA13Q9Y5I0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.33■■□□□ 1.17
PCDHA13Q9Y5I0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA13Q9Y5I0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA13Q9Y5I0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA13Q9Y5I0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA13Q9Y5I0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA13Q9Y5I0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA13Q9Y5I0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA13Q9Y5I0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA13Q9Y5I0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHA13Q9Y5I0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHA13Q9Y5I0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHA13Q9Y5I0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHA13Q9Y5I0 AC027702.1-201ENST00000563810 1770 ntBASIC22.33■■□□□ 1.16
PCDHA13Q9Y5I0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 AC009237.3-201ENST00000393279 1427 ntBASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 MIR4767-201ENST00000582827 78 ntBASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 AC055733.4-201ENST00000638462 1354 ntBASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHA13Q9Y5I0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 AC233992.3-201ENST00000607491 485 ntBASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHA13Q9Y5I0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA13Q9Y5I0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA13Q9Y5I0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDHA13Q9Y5I0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA13Q9Y5I0 AC007225.1-201ENST00000566331 1836 ntBASIC22.3■■□□□ 1.16
PCDHA13Q9Y5I0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA13Q9Y5I0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA13Q9Y5I0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PCDHA13Q9Y5I0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHA13Q9Y5I0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 AL121603.2-201ENST00000557373 2117 ntBASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PCDHA13Q9Y5I0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 AC126544.1-201ENST00000580842 1059 ntBASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 AL391422.3-201ENST00000603791 2761 ntBASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHA13Q9Y5I0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 UNC93B3-201ENST00000308076 687 ntBASIC22.27■■□□□ 1.16
PCDHA13Q9Y5I0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms