Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 AC016769.1-201ENST00000409132 1010 ntBASIC18.25■□□□□ 0.51
CDH20Q9HBT6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 KRT18P61-201ENST00000585825 1298 ntBASIC18.25■□□□□ 0.51
CDH20Q9HBT6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CDH20Q9HBT6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDH20Q9HBT6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDH20Q9HBT6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH20Q9HBT6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 KRT18P20-201ENST00000548986 1279 ntBASIC18.21■□□□□ 0.51
CDH20Q9HBT6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH20Q9HBT6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms