Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YER006C-AYER006C-A 318 nt3.87□□□□□ -1.79
SSL2Q00578 AML1YGR001C 747 nt3.87□□□□□ -1.79
SSL2Q00578 SPT4YGR063C 309 nt3.87□□□□□ -1.79
SSL2Q00578 YHR125WYHR125W 306 nt3.87□□□□□ -1.79
SSL2Q00578 YAL004WYAL004W 648 nt3.87□□□□□ -1.79
SSL2Q00578 PEP8YJL053W 1140 nt3.87□□□□□ -1.79
SSL2Q00578 RPL17BYJL177W 555 nt3.87□□□□□ -1.79
SSL2Q00578 VPS51YKR020W 495 nt3.87□□□□□ -1.79
SSL2Q00578 YLR297WYLR297W 390 nt3.87□□□□□ -1.79
SSL2Q00578 PBI2YNL015W 228 nt3.87□□□□□ -1.79
SSL2Q00578 GPI15YNL038W 690 nt3.87□□□□□ -1.79
SSL2Q00578 RFC3YNL290W 1023 nt3.87□□□□□ -1.79
SSL2Q00578 YOR199WYOR199W 330 nt3.87□□□□□ -1.79
SSL2Q00578 YOR248WYOR248W 303 nt3.87□□□□□ -1.79
SSL2Q00578 IMD4YML056C 1575 nt3.87□□□□□ -1.79
SSL2Q00578 CPA2YJR109C 3357 nt3.87□□□□□ -1.79
SSL2Q00578 ASI3YNL008C 2031 nt3.87□□□□□ -1.79
SSL2Q00578 ERB1YMR049C 2424 nt3.86□□□□□ -1.79
SSL2Q00578 JEN1YKL217W 1851 nt3.86□□□□□ -1.79
SSL2Q00578 RSM24YDR175C 960 nt3.86□□□□□ -1.79
SSL2Q00578 RPL30YGL030W 318 nt3.86□□□□□ -1.79
SSL2Q00578 YHL026CYHL026C 948 nt3.86□□□□□ -1.79
SSL2Q00578 NNF1YJR112W 606 nt3.86□□□□□ -1.79
SSL2Q00578 RPS21AYKR057W 264 nt3.86□□□□□ -1.79
SSL2Q00578 YOL159CYOL159C 516 nt3.86□□□□□ -1.79
SSL2Q00578 CAT5YOR125C 702 nt3.86□□□□□ -1.79
SSL2Q00578 YBR137WYBR137W 540 nt3.86□□□□□ -1.79
SSL2Q00578 SKO1YNL167C 1944 nt3.85□□□□□ -1.79
SSL2Q00578 STP1YDR463W 1560 nt3.85□□□□□ -1.79
SSL2Q00578 ANR2YKL047W 1551 nt3.85□□□□□ -1.79
SSL2Q00578 EBS1YDR206W 2655 nt3.85□□□□□ -1.79
SSL2Q00578 SDO1YLR022C 753 nt3.85□□□□□ -1.79
SSL2Q00578 DDR48YMR173W 1293 nt3.85□□□□□ -1.79
SSL2Q00578 YMR193C-AYMR193C-A 387 nt3.85□□□□□ -1.79
SSL2Q00578 GIS2YNL255C 462 nt3.85□□□□□ -1.79
SSL2Q00578 YNL276CYNL276C 396 nt3.85□□□□□ -1.79
SSL2Q00578 RNT1YMR239C 1416 nt3.85□□□□□ -1.79
SSL2Q00578 TFB2YPL122C 1542 nt3.85□□□□□ -1.79
SSL2Q00578 YEL025CYEL025C 3567 nt3.84□□□□□ -1.79
SSL2Q00578 HLR1YDR528W 1272 nt3.84□□□□□ -1.79
SSL2Q00578 GPP2YER062C 753 nt3.84□□□□□ -1.79
SSL2Q00578 TDA2YER071C 381 nt3.84□□□□□ -1.79
SSL2Q00578 MCR1YKL150W 909 nt3.84□□□□□ -1.79
SSL2Q00578 YMR087WYMR087W 855 nt3.84□□□□□ -1.79
SSL2Q00578 YMR153C-AYMR153C-A 336 nt3.84□□□□□ -1.79
SSL2Q00578 DIB1YPR082C 432 nt3.84□□□□□ -1.79
SSL2Q00578 MSS18YPR134W 807 nt3.84□□□□□ -1.79
SSL2Q00578 NUP60YAR002W 1620 nt3.84□□□□□ -1.8
SSL2Q00578 MIT1YEL007W 2001 nt3.83□□□□□ -1.8
SSL2Q00578 YDL199CYDL199C 2064 nt3.83□□□□□ -1.8
SSL2Q00578 YCR064CYCR064C 411 nt3.83□□□□□ -1.8
SSL2Q00578 CHZ1YER030W 462 nt3.83□□□□□ -1.8
SSL2Q00578 YFL015CYFL015C 495 nt3.83□□□□□ -1.8
SSL2Q00578 IRC18YJL037W 675 nt3.83□□□□□ -1.8
SSL2Q00578 SOD1YJR104C 465 nt3.83□□□□□ -1.8
SSL2Q00578 RPL22AYLR061W 366 nt3.83□□□□□ -1.8
SSL2Q00578 RDN58-1RDN58-1 158 nt3.83□□□□□ -1.8
SSL2Q00578 RDN58-2RDN58-2 158 nt3.83□□□□□ -1.8
SSL2Q00578 YOR082CYOR082C 342 nt3.83□□□□□ -1.8
SSL2Q00578 FMP23YBR047W 528 nt3.83□□□□□ -1.8
SSL2Q00578 SVS1YPL163C 783 nt3.83□□□□□ -1.8
SSL2Q00578 YPL185WYPL185W 396 nt3.83□□□□□ -1.8
SSL2Q00578 YPR136CYPR136C 513 nt3.83□□□□□ -1.8
SSL2Q00578 PHO88YBR106W 567 nt3.83□□□□□ -1.8
SSL2Q00578 FLO10YKR102W 3510 nt3.83□□□□□ -1.8
SSL2Q00578 MIP6YHR015W 1980 nt3.82□□□□□ -1.8
SSL2Q00578 WHI3YNL197C 1986 nt3.82□□□□□ -1.8
SSL2Q00578 BMH2YDR099W 822 nt3.82□□□□□ -1.8
SSL2Q00578 PMI40YER003C 1290 nt3.82□□□□□ -1.8
SSL2Q00578 MTC3YGL226W 372 nt3.82□□□□□ -1.8
SSL2Q00578 CFD1YIL003W 882 nt3.82□□□□□ -1.8
SSL2Q00578 YIL115W-AYIL115W-A 372 nt3.82□□□□□ -1.8
SSL2Q00578 YIL175WYIL175W 318 nt3.82□□□□□ -1.8
SSL2Q00578 YIR020CYIR020C 303 nt3.82□□□□□ -1.8
SSL2Q00578 YLR101CYLR101C 396 nt3.82□□□□□ -1.8
SSL2Q00578 YSY6YBR162W-A 198 nt3.82□□□□□ -1.8
SSL2Q00578 RPA135YPR010C 3612 nt3.82□□□□□ -1.8
SSL2Q00578 SEC27YGL137W 2670 nt3.82□□□□□ -1.8
SSL2Q00578 MUD2YKL074C 1584 nt3.81□□□□□ -1.8
SSL2Q00578 GAL80YML051W 1308 nt3.81□□□□□ -1.8
SSL2Q00578 FRE4YNR060W 2160 nt3.81□□□□□ -1.8
SSL2Q00578 FAP7YDL166C 594 nt3.81□□□□□ -1.8
SSL2Q00578 YDR115WYDR115W 318 nt3.81□□□□□ -1.8
SSL2Q00578 YDR464C-AYDR464C-A 189 nt3.81□□□□□ -1.8
SSL2Q00578 ECL1YGR146C 636 nt3.81□□□□□ -1.8
SSL2Q00578 CSE4YKL049C 690 nt3.81□□□□□ -1.8
SSL2Q00578 TMA19YKL056C 504 nt3.81□□□□□ -1.8
SSL2Q00578 PIR1YKL164C 1026 nt3.81□□□□□ -1.8
SSL2Q00578 YKT6YKL196C 603 nt3.81□□□□□ -1.8
SSL2Q00578 YAL068W-AYAL068W-A 255 nt3.81□□□□□ -1.8
SSL2Q00578 YNL150WYNL150W 408 nt3.81□□□□□ -1.8
SSL2Q00578 YPL035CYPL035C 348 nt3.81□□□□□ -1.8
SSL2Q00578 YPR050CYPR050C 414 nt3.81□□□□□ -1.8
SSL2Q00578 LCB5YLR260W 2064 nt3.8□□□□□ -1.8
SSL2Q00578 FUS2YMR232W 2034 nt3.8□□□□□ -1.8
SSL2Q00578 YDR340WYDR340W 303 nt3.8□□□□□ -1.8
SSL2Q00578 CGR1YGL029W 363 nt3.8□□□□□ -1.8
SSL2Q00578 RTT102YGR275W 474 nt3.8□□□□□ -1.8
SSL2Q00578 SDP1YIL113W 630 nt3.8□□□□□ -1.8
SSL2Q00578 AEP1YMR064W 1557 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 55.4 ms