Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 CWH41YGL027C 2502 nt3.31□□□□□ -1.88
TY2A-FP0CX61 PMT6YGR199W 2280 nt3.31□□□□□ -1.88
TY2A-FP0CX61 GYL1YMR192W 2163 nt3.31□□□□□ -1.88
TY2A-FP0CX61 XRN1YGL173C 4587 nt3.31□□□□□ -1.88
TY2A-FP0CX61 STI1YOR027W 1770 nt3.3□□□□□ -1.88
TY2A-FP0CX61 SHE9YDR393W 1371 nt3.3□□□□□ -1.88
TY2A-FP0CX61 RSM24YDR175C 960 nt3.3□□□□□ -1.88
TY2A-FP0CX61 MTC3YGL226W 372 nt3.3□□□□□ -1.88
TY2A-FP0CX61 YIR020C-BYIR020C-B 735 nt3.3□□□□□ -1.88
TY2A-FP0CX61 SEC14YMR079W 915 nt3.3□□□□□ -1.88
TY2A-FP0CX61 TUM1YOR251C 915 nt3.3□□□□□ -1.88
TY2A-FP0CX61 YPL142CYPL142C 318 nt3.3□□□□□ -1.88
TY2A-FP0CX61 JID1YPR061C 906 nt3.3□□□□□ -1.88
TY2A-FP0CX61 TRS20YBR254C 528 nt3.3□□□□□ -1.88
TY2A-FP0CX61 NEL1YHR035W 1893 nt3.3□□□□□ -1.88
TY2A-FP0CX61 TAF1YGR274C 3201 nt3.3□□□□□ -1.88
TY2A-FP0CX61 MSH2YOL090W 2895 nt3.3□□□□□ -1.88
TY2A-FP0CX61 YCG1YDR325W 3108 nt3.29□□□□□ -1.88
TY2A-FP0CX61 RPN2YIL075C 2838 nt3.29□□□□□ -1.88
TY2A-FP0CX61 RPS14AYCR031C 414 nt3.29□□□□□ -1.88
TY2A-FP0CX61 snR84snR84 550 nt3.29□□□□□ -1.88
TY2A-FP0CX61 TDA2YER071C 381 nt3.29□□□□□ -1.88
TY2A-FP0CX61 FAR7YFR008W 666 nt3.29□□□□□ -1.88
TY2A-FP0CX61 YLR456WYLR456W 615 nt3.29□□□□□ -1.88
TY2A-FP0CX61 RPS16AYMR143W 432 nt3.29□□□□□ -1.88
TY2A-FP0CX61 CSI2YOL007C 1026 nt3.29□□□□□ -1.88
TY2A-FP0CX61 PFY1YOR122C 381 nt3.29□□□□□ -1.88
TY2A-FP0CX61 YOR277CYOR277C 309 nt3.29□□□□□ -1.88
TY2A-FP0CX61 MRPL40YPL173W 894 nt3.29□□□□□ -1.88
TY2A-FP0CX61 YPR108W-AYPR108W-A 213 nt3.29□□□□□ -1.88
TY2A-FP0CX61 LRG1YDL240W 3054 nt3.28□□□□□ -1.88
TY2A-FP0CX61 SHS1YDL225W 1656 nt3.28□□□□□ -1.88
TY2A-FP0CX61 RSC1YGR056W 2787 nt3.28□□□□□ -1.88
TY2A-FP0CX61 MGT1YDL200C 567 nt3.28□□□□□ -1.88
TY2A-FP0CX61 RPS23AYGR118W 438 nt3.28□□□□□ -1.88
TY2A-FP0CX61 ARC18YLR370C 537 nt3.28□□□□□ -1.88
TY2A-FP0CX61 ATP18YML081C-A 180 nt3.28□□□□□ -1.88
TY2A-FP0CX61 RPS23BYPR132W 438 nt3.28□□□□□ -1.88
TY2A-FP0CX61 15S_rRNA15S_rRNA 1649 nt3.28□□□□□ -1.88
TY2A-FP0CX61 YJL132WYJL132W 2253 nt3.28□□□□□ -1.88
TY2A-FP0CX61 YPR003CYPR003C 2265 nt3.28□□□□□ -1.88
TY2A-FP0CX61 MNT3YIL014W 1893 nt3.28□□□□□ -1.88
TY2A-FP0CX61 HOP1YIL072W 1818 nt3.28□□□□□ -1.88
TY2A-FP0CX61 JJJ1YNL227C 1773 nt3.28□□□□□ -1.89
TY2A-FP0CX61 MDN1YLR106C 14733 nt3.27□□□□□ -1.89
TY2A-FP0CX61 SET1YHR119W 3243 nt3.27□□□□□ -1.89
TY2A-FP0CX61 MYO3YKL129C 3819 nt3.27□□□□□ -1.89
TY2A-FP0CX61 TGL3YMR313C 1929 nt3.27□□□□□ -1.89
TY2A-FP0CX61 CBP2YHL038C 1893 nt3.27□□□□□ -1.89
TY2A-FP0CX61 RPN3YER021W 1572 nt3.27□□□□□ -1.89
TY2A-FP0CX61 SPA2YLL021W 4401 nt3.27□□□□□ -1.89
TY2A-FP0CX61 MTC7YEL033W 420 nt3.27□□□□□ -1.89
TY2A-FP0CX61 PET54YGR222W 882 nt3.27□□□□□ -1.89
TY2A-FP0CX61 YHR213WYHR213W 597 nt3.27□□□□□ -1.89
TY2A-FP0CX61 YAP5YIR018W 738 nt3.27□□□□□ -1.89
TY2A-FP0CX61 YJL169WYJL169W 369 nt3.27□□□□□ -1.89
TY2A-FP0CX61 YAL031W-AYAL031W-A 309 nt3.27□□□□□ -1.89
TY2A-FP0CX61 TDA8YAL064C-A 381 nt3.27□□□□□ -1.89
TY2A-FP0CX61 ECM4YKR076W 1113 nt3.27□□□□□ -1.89
TY2A-FP0CX61 YAR062WYAR062W 597 nt3.27□□□□□ -1.89
TY2A-FP0CX61 YNL109WYNL109W 546 nt3.27□□□□□ -1.89
TY2A-FP0CX61 YOL013W-BYOL013W-B 291 nt3.27□□□□□ -1.89
TY2A-FP0CX61 YGL140CYGL140C 3660 nt3.26□□□□□ -1.89
TY2A-FP0CX61 NCB2YDR397C 441 nt3.26□□□□□ -1.89
TY2A-FP0CX61 YGL214WYGL214W 486 nt3.26□□□□□ -1.89
TY2A-FP0CX61 GIC1YHR061C 945 nt3.26□□□□□ -1.89
TY2A-FP0CX61 tV(CAC)DtV(CAC)D 73 nt3.26□□□□□ -1.89
TY2A-FP0CX61 tV(CAC)HtV(CAC)H 73 nt3.26□□□□□ -1.89
TY2A-FP0CX61 YJL119CYJL119C 324 nt3.26□□□□□ -1.89
TY2A-FP0CX61 AIM26YKL037W 357 nt3.26□□□□□ -1.89
TY2A-FP0CX61 ADI1YMR009W 540 nt3.26□□□□□ -1.89
TY2A-FP0CX61 MSN1YOL116W 1149 nt3.26□□□□□ -1.89
TY2A-FP0CX61 RCN2YOR220W 798 nt3.26□□□□□ -1.89
TY2A-FP0CX61 ALA1YOR335C 2877 nt3.26□□□□□ -1.89
TY2A-FP0CX61 STU1YBL034C 4542 nt3.26□□□□□ -1.89
TY2A-FP0CX61 MYO5YMR109W 3660 nt3.25□□□□□ -1.89
TY2A-FP0CX61 YDR338CYDR338C 2088 nt3.25□□□□□ -1.89
TY2A-FP0CX61 SNA4YDL123W 423 nt3.25□□□□□ -1.89
TY2A-FP0CX61 YDR115WYDR115W 318 nt3.25□□□□□ -1.89
TY2A-FP0CX61 RPB9YGL070C 369 nt3.25□□□□□ -1.89
TY2A-FP0CX61 YGR228WYGR228W 345 nt3.25□□□□□ -1.89
TY2A-FP0CX61 SDL1YIL167W 633 nt3.25□□□□□ -1.89
TY2A-FP0CX61 YKR051WYKR051W 1257 nt3.25□□□□□ -1.89
TY2A-FP0CX61 RPL22AYLR061W 366 nt3.25□□□□□ -1.89
TY2A-FP0CX61 YNL150WYNL150W 408 nt3.25□□□□□ -1.89
TY2A-FP0CX61 YBR051WYBR051W 351 nt3.25□□□□□ -1.89
TY2A-FP0CX61 YBR062CYBR062C 543 nt3.25□□□□□ -1.89
TY2A-FP0CX61 AIM4YBR194W 372 nt3.25□□□□□ -1.89
TY2A-FP0CX61 URB2YJR041C 3525 nt3.25□□□□□ -1.89
TY2A-FP0CX61 SWC4YGR002C 1431 nt3.25□□□□□ -1.89
TY2A-FP0CX61 RSF2YJR127C 4143 nt3.25□□□□□ -1.89
TY2A-FP0CX61 EAP1YKL204W 1899 nt3.24□□□□□ -1.89
TY2A-FP0CX61 YDL187CYDL187C 330 nt3.24□□□□□ -1.89
TY2A-FP0CX61 YDR220CYDR220C 294 nt3.24□□□□□ -1.89
TY2A-FP0CX61 VMA8YEL051W 771 nt3.24□□□□□ -1.89
TY2A-FP0CX61 ANB1YJR047C 474 nt3.24□□□□□ -1.89
TY2A-FP0CX61 RFC3YNL290W 1023 nt3.24□□□□□ -1.89
TY2A-FP0CX61 TPK2YPL203W 1143 nt3.24□□□□□ -1.89
TY2A-FP0CX61 NTC20YBR188C 423 nt3.24□□□□□ -1.89
TY2A-FP0CX61 KHA1YJL094C 2622 nt3.24□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 57.4 ms