Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.27■□□□□ 0.52
UPK1BO75841 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
UPK1BO75841 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.27■□□□□ 0.52
UPK1BO75841 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
UPK1BO75841 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
UPK1BO75841 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1BO75841 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.27■□□□□ 0.51
UPK1BO75841 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.27■□□□□ 0.51
UPK1BO75841 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UPK1BO75841 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
UPK1BO75841 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
UPK1BO75841 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
UPK1BO75841 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UPK1BO75841 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.26■□□□□ 0.51
UPK1BO75841 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1BO75841 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1BO75841 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1BO75841 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.26■□□□□ 0.51
UPK1BO75841 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1BO75841 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UPK1BO75841 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1BO75841 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
UPK1BO75841 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.26■□□□□ 0.51
UPK1BO75841 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1BO75841 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UPK1BO75841 AC007225.1-201ENST00000566331 1836 ntBASIC18.26■□□□□ 0.51
UPK1BO75841 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
UPK1BO75841 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
UPK1BO75841 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
UPK1BO75841 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
UPK1BO75841 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.25■□□□□ 0.51
UPK1BO75841 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
UPK1BO75841 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.25■□□□□ 0.51
UPK1BO75841 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
UPK1BO75841 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.25■□□□□ 0.51
UPK1BO75841 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPK1BO75841 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.24■□□□□ 0.51
UPK1BO75841 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.24■□□□□ 0.51
UPK1BO75841 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
UPK1BO75841 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
UPK1BO75841 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 AC087393.1-201ENST00000582896 145 ntBASIC18.24■□□□□ 0.51
UPK1BO75841 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
UPK1BO75841 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.24■□□□□ 0.51
UPK1BO75841 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPK1BO75841 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1BO75841 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1BO75841 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1BO75841 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1BO75841 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.23■□□□□ 0.51
UPK1BO75841 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
UPK1BO75841 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1BO75841 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.23■□□□□ 0.51
UPK1BO75841 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.23■□□□□ 0.51
UPK1BO75841 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPK1BO75841 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.23■□□□□ 0.51
UPK1BO75841 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.23■□□□□ 0.51
UPK1BO75841 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.23■□□□□ 0.51
UPK1BO75841 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1BO75841 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1BO75841 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1BO75841 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.22■□□□□ 0.51
UPK1BO75841 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK1BO75841 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1BO75841 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.22■□□□□ 0.51
UPK1BO75841 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1BO75841 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UPK1BO75841 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.22■□□□□ 0.51
UPK1BO75841 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1BO75841 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1BO75841 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1BO75841 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UPK1BO75841 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UPK1BO75841 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms