RNA–Protein interactions for RNA: ENST00000317945.6

CCDC34-201, Transcript of coiled-coil domain containing 34, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC34, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34-201ENST00000317945 NISCHQ9Y2I1 1504 aa38.59■■■■□ 3.77
CCDC34-201ENST00000317945 CCDC180Q9P1Z9 1646 aa32.82■■■□□ 2.84
CCDC34-201ENST00000317945 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
CCDC34-201ENST00000317945 SHROOM4Q9ULL8 1493 aa32.65■■■□□ 2.82
CCDC34-201ENST00000317945 SUPT5HO00267 1087 aaKnown RBP32.2■■■□□ 2.74
CCDC34-201ENST00000317945 DCAF1Q9Y4B6 1507 aa31.88■■■□□ 2.69
CCDC34-201ENST00000317945 CHIC1Q5VXU3 224 aa31.63■■■□□ 2.65
CCDC34-201ENST00000317945 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
CCDC34-201ENST00000317945 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
CCDC34-201ENST00000317945 HRCP23327 699 aa31.11■■■□□ 2.57
CCDC34-201ENST00000317945 ABCC9O60706 1549 aa30.9■■■□□ 2.54
CCDC34-201ENST00000317945 PCGF6Q9BYE7 350 aa30.74■■■□□ 2.51
CCDC34-201ENST00000317945 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
CCDC34-201ENST00000317945 LOC105371045A0A1W2PR82 267 aa30.5■■■□□ 2.47
CCDC34-201ENST00000317945 SCRIBQ14160 1630 aa30.49■■■□□ 2.47
CCDC34-201ENST00000317945 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
CCDC34-201ENST00000317945 TRIM26Q12899 539 aaPredicted RBP30.34■■■□□ 2.45
CCDC34-201ENST00000317945 NACADO15069 1562 aa30.28■■■□□ 2.44
CCDC34-201ENST00000317945 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
CCDC34-201ENST00000317945 PPARGC1BQ86YN6 1023 aaKnown RBP30.1■■■□□ 2.41
CCDC34-201ENST00000317945 ZEB1P37275 1124 aaPredicted RBP29.95■■■□□ 2.39
CCDC34-201ENST00000317945 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
CCDC34-201ENST00000317945 MROH2BQ7Z745 1585 aa29.89■■■□□ 2.38
CCDC34-201ENST00000317945 BAZ1AQ9NRL2 1556 aaPredicted RBP29.72■■■□□ 2.35
CCDC34-201ENST00000317945 WIZO95785 1651 aa29.7■■■□□ 2.35
CCDC34-201ENST00000317945 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
CCDC34-201ENST00000317945 EIF4G1Q04637 1599 aaKnown RBP29.57■■■□□ 2.32
CCDC34-201ENST00000317945 TOP2AP11388 1531 aaKnown RBP29.42■■■□□ 2.3
CCDC34-201ENST00000317945 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
CCDC34-201ENST00000317945 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
CCDC34-201ENST00000317945 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
CCDC34-201ENST00000317945 EHMT2Q96KQ7 1210 aa29.19■■■□□ 2.26
CCDC34-201ENST00000317945 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
CCDC34-201ENST00000317945 EEA1Q15075 1411 aa29.12■■■□□ 2.25
CCDC34-201ENST00000317945 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
CCDC34-201ENST00000317945 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
CCDC34-201ENST00000317945 TNIKQ9UKE5 1360 aa29.02■■■□□ 2.24
CCDC34-201ENST00000317945 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
CCDC34-201ENST00000317945 CEP162Q5TB80 1403 aa28.96■■■□□ 2.23
CCDC34-201ENST00000317945 SOGA1O94964 1423 aa28.89■■■□□ 2.21
CCDC34-201ENST00000317945 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.21
CCDC34-201ENST00000317945 CCER1Q8TC90 406 aaPredicted RBP28.88■■■□□ 2.21
CCDC34-201ENST00000317945 CSRNP3Q8WYN3 585 aa28.86■■■□□ 2.21
CCDC34-201ENST00000317945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.82■■■□□ 2.2
CCDC34-201ENST00000317945 GOLGA3Q08378 1498 aa28.78■■■□□ 2.2
CCDC34-201ENST00000317945 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
CCDC34-201ENST00000317945 PELP1Q8IZL8 1130 aaKnown RBP28.75■■■□□ 2.19
CCDC34-201ENST00000317945 RUSC2Q8N2Y8 1516 aa28.67■■■□□ 2.18
CCDC34-201ENST00000317945 SCAF1Q9H7N4 1312 aaKnown RBP28.66■■■□□ 2.18
CCDC34-201ENST00000317945 UBTFP17480 764 aaKnown RBP28.63■■■□□ 2.17
CCDC34-201ENST00000317945 CEP164Q9UPV0 1460 aa28.61■■■□□ 2.17
CCDC34-201ENST00000317945 KIF21BO75037 1637 aa28.6■■■□□ 2.17
CCDC34-201ENST00000317945 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
CCDC34-201ENST00000317945 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
CCDC34-201ENST00000317945 DIEXFQ68CQ4 756 aaKnown RBP28.49■■■□□ 2.15
CCDC34-201ENST00000317945 BAZ1BQ9UIG0 1483 aaKnown RBP28.48■■■□□ 2.15
CCDC34-201ENST00000317945 ACIN1Q9UKV3 1341 aaKnown RBP28.46■■■□□ 2.15
CCDC34-201ENST00000317945 CLIP1P30622 1438 aa28.39■■■□□ 2.14
CCDC34-201ENST00000317945 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
CCDC34-201ENST00000317945 VPS8Q8N3P4 1428 aa28.36■■■□□ 2.13
CCDC34-201ENST00000317945 CENPBP07199 599 aaPredicted RBP28.35■■■□□ 2.13
CCDC34-201ENST00000317945 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
CCDC34-201ENST00000317945 ZNF316A6NFI3 1004 aaPredicted RBP28.3■■■□□ 2.12
CCDC34-201ENST00000317945 NEUROD1Q13562 356 aa28.26■■■□□ 2.11
CCDC34-201ENST00000317945 TOP2BQ02880 1626 aa28.26■■■□□ 2.11
CCDC34-201ENST00000317945 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
CCDC34-201ENST00000317945 APLP2Q06481 763 aa28.17■■■□□ 2.1
CCDC34-201ENST00000317945 BIVM-ERCC5R4GMW8 1640 aa28.17■■■□□ 2.1
CCDC34-201ENST00000317945 ERICH3Q5RHP9 1530 aa28.15■■■□□ 2.1
CCDC34-201ENST00000317945 PRXQ9BXM0 1461 aa28.06■■■□□ 2.08
CCDC34-201ENST00000317945 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
CCDC34-201ENST00000317945 HMGXB3Q12766 1538 aa28.03■■■□□ 2.08
CCDC34-201ENST00000317945 CLSPNQ9HAW4 1339 aa28.03■■■□□ 2.08
CCDC34-201ENST00000317945 GTF3C3Q9Y5Q9 886 aa28.01■■■□□ 2.08
CCDC34-201ENST00000317945 NCAPD3P42695 1498 aa28■■■□□ 2.07
CCDC34-201ENST00000317945 ARAP1Q96P48 1450 aa27.9■■■□□ 2.06
CCDC34-201ENST00000317945 KIF27Q86VH2 1401 aa27.86■■■□□ 2.05
CCDC34-201ENST00000317945 CUX1P39880 1505 aa27.84■■■□□ 2.05
CCDC34-201ENST00000317945 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
CCDC34-201ENST00000317945 CFTRP13569 1480 aa27.8■■■□□ 2.04
CCDC34-201ENST00000317945 RRBP1Q9P2E9 1410 aaKnown RBP27.78■■■□□ 2.04
CCDC34-201ENST00000317945 MIER1Q8N108 512 aa27.77■■■□□ 2.04
CCDC34-201ENST00000317945 DHX57Q6P158 1386 aaKnown RBP27.75■■■□□ 2.03
CCDC34-201ENST00000317945 CUX2O14529 1486 aa27.73■■■□□ 2.03
CCDC34-201ENST00000317945 RANGAP1P46060 587 aaPredicted RBP27.71■■■□□ 2.03
CCDC34-201ENST00000317945 KANK4Q5T7N3 995 aaPredicted RBP27.65■■■□□ 2.02
CCDC34-201ENST00000317945 ARHGAP35Q9NRY4 1499 aa27.62■■■□□ 2.01
CCDC34-201ENST00000317945 MAP3K1Q13233 1512 aa27.59■■■□□ 2.01
CCDC34-201ENST00000317945 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
CCDC34-201ENST00000317945 YTHDC1Q96MU7 727 aaKnown RBP27.59■■■□□ 2.01
CCDC34-201ENST00000317945 CCNB3Q8WWL7 1395 aa27.57■■■□□ 2
CCDC34-201ENST00000317945 IGF1RP08069 1367 aa27.49■■□□□ 1.99
CCDC34-201ENST00000317945 MYT1Q01538 1121 aa27.44■■□□□ 1.98
CCDC34-201ENST00000317945 CADPSQ9ULU8 1353 aa27.41■■□□□ 1.98
CCDC34-201ENST00000317945 TIAM1Q13009 1591 aa27.4■■□□□ 1.98
CCDC34-201ENST00000317945 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
CCDC34-201ENST00000317945 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.96
CCDC34-201ENST00000317945 LRRC9Q6ZRR7 1453 aa27.31■■□□□ 1.96
CCDC34-201ENST00000317945 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
CCDC34-201ENST00000317945 RAB3GAP2Q9H2M9 1393 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 722 ms