RNA–Protein interactions for RNA: ENST00000317945.6

CCDC34-201, Transcript of coiled-coil domain containing 34, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC34, Length 2,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC34-201ENST00000317945 NISCHQ9Y2I1 1504 aa38.59■■■■□ 3.77
CCDC34-201ENST00000317945 CCDC180Q9P1Z9 1646 aa32.82■■■□□ 2.84
CCDC34-201ENST00000317945 ZCCHC6Q5VYS8 1495 aaKnown RBP32.72■■■□□ 2.83
CCDC34-201ENST00000317945 SHROOM4Q9ULL8 1493 aa32.65■■■□□ 2.82
CCDC34-201ENST00000317945 SUPT5HO00267 1087 aaKnown RBP32.2■■■□□ 2.74
CCDC34-201ENST00000317945 DCAF1Q9Y4B6 1507 aa31.88■■■□□ 2.69
CCDC34-201ENST00000317945 CHIC1Q5VXU3 224 aa31.63■■■□□ 2.65
CCDC34-201ENST00000317945 DCAF8L2P0C7V8 631 aa31.5■■■□□ 2.63
CCDC34-201ENST00000317945 MYO15BQ96JP2 1530 aa31.44■■■□□ 2.62
CCDC34-201ENST00000317945 HRCP23327 699 aa31.11■■■□□ 2.57
CCDC34-201ENST00000317945 ABCC9O60706 1549 aa30.9■■■□□ 2.54
CCDC34-201ENST00000317945 PCGF6Q9BYE7 350 aa30.74■■■□□ 2.51
CCDC34-201ENST00000317945 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
CCDC34-201ENST00000317945 LOC105371045A0A1W2PR82 267 aa30.5■■■□□ 2.47
CCDC34-201ENST00000317945 SCRIBQ14160 1630 aa30.49■■■□□ 2.47
CCDC34-201ENST00000317945 RB1CC1Q8TDY2 1594 aa30.37■■■□□ 2.45
CCDC34-201ENST00000317945 TRIM26Q12899 539 aaPredicted RBP30.34■■■□□ 2.45
CCDC34-201ENST00000317945 NACADO15069 1562 aa30.28■■■□□ 2.44
CCDC34-201ENST00000317945 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
CCDC34-201ENST00000317945 PPARGC1BQ86YN6 1023 aaKnown RBP30.1■■■□□ 2.41
CCDC34-201ENST00000317945 ZEB1P37275 1124 aaPredicted RBP29.95■■■□□ 2.39
CCDC34-201ENST00000317945 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
CCDC34-201ENST00000317945 MROH2BQ7Z745 1585 aa29.89■■■□□ 2.38
CCDC34-201ENST00000317945 BAZ1AQ9NRL2 1556 aaPredicted RBP29.72■■■□□ 2.35
CCDC34-201ENST00000317945 WIZO95785 1651 aa29.7■■■□□ 2.35
CCDC34-201ENST00000317945 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
CCDC34-201ENST00000317945 EIF4G1Q04637 1599 aaKnown RBP29.57■■■□□ 2.32
CCDC34-201ENST00000317945 TOP2AP11388 1531 aaKnown RBP29.42■■■□□ 2.3
CCDC34-201ENST00000317945 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
CCDC34-201ENST00000317945 CCDC88BA6NC98 1476 aa29.21■■■□□ 2.27
CCDC34-201ENST00000317945 SMARCA2P51531 1590 aa29.2■■■□□ 2.26
CCDC34-201ENST00000317945 EHMT2Q96KQ7 1210 aa29.19■■■□□ 2.26
CCDC34-201ENST00000317945 WRNQ14191 1432 aaPredicted RBP eCLIP29.18■■■□□ 2.26
CCDC34-201ENST00000317945 EEA1Q15075 1411 aa29.12■■■□□ 2.25
CCDC34-201ENST00000317945 ABCC8Q09428 1581 aa29.06■■■□□ 2.24
CCDC34-201ENST00000317945 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
CCDC34-201ENST00000317945 TNIKQ9UKE5 1360 aa29.02■■■□□ 2.24
CCDC34-201ENST00000317945 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
CCDC34-201ENST00000317945 CEP162Q5TB80 1403 aa28.96■■■□□ 2.23
CCDC34-201ENST00000317945 SOGA1O94964 1423 aa28.89■■■□□ 2.21
CCDC34-201ENST00000317945 PEG3Q9GZU2 1588 aa28.89■■■□□ 2.21
CCDC34-201ENST00000317945 CCER1Q8TC90 406 aaPredicted RBP28.88■■■□□ 2.21
CCDC34-201ENST00000317945 CSRNP3Q8WYN3 585 aa28.86■■■□□ 2.21
CCDC34-201ENST00000317945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.82■■■□□ 2.2
CCDC34-201ENST00000317945 GOLGA3Q08378 1498 aa28.78■■■□□ 2.2
CCDC34-201ENST00000317945 BICRAQ9NZM4 1560 aa28.76■■■□□ 2.19
CCDC34-201ENST00000317945 PELP1Q8IZL8 1130 aaKnown RBP28.75■■■□□ 2.19
CCDC34-201ENST00000317945 RUSC2Q8N2Y8 1516 aa28.67■■■□□ 2.18
CCDC34-201ENST00000317945 SCAF1Q9H7N4 1312 aaKnown RBP28.66■■■□□ 2.18
CCDC34-201ENST00000317945 UBTFP17480 764 aaKnown RBP28.63■■■□□ 2.17
CCDC34-201ENST00000317945 CEP164Q9UPV0 1460 aa28.61■■■□□ 2.17
CCDC34-201ENST00000317945 KIF21BO75037 1637 aa28.6■■■□□ 2.17
CCDC34-201ENST00000317945 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
CCDC34-201ENST00000317945 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
CCDC34-201ENST00000317945 DIEXFQ68CQ4 756 aaKnown RBP28.49■■■□□ 2.15
CCDC34-201ENST00000317945 BAZ1BQ9UIG0 1483 aaKnown RBP28.48■■■□□ 2.15
CCDC34-201ENST00000317945 ACIN1Q9UKV3 1341 aaKnown RBP28.46■■■□□ 2.15
CCDC34-201ENST00000317945 CLIP1P30622 1438 aa28.39■■■□□ 2.14
CCDC34-201ENST00000317945 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
CCDC34-201ENST00000317945 VPS8Q8N3P4 1428 aa28.36■■■□□ 2.13
CCDC34-201ENST00000317945 CENPBP07199 599 aaPredicted RBP28.35■■■□□ 2.13
CCDC34-201ENST00000317945 DNAJC5BQ9UF47 199 aa28.35■■■□□ 2.13
CCDC34-201ENST00000317945 ZNF316A6NFI3 1004 aaPredicted RBP28.3■■■□□ 2.12
CCDC34-201ENST00000317945 NEUROD1Q13562 356 aa28.26■■■□□ 2.11
CCDC34-201ENST00000317945 TOP2BQ02880 1626 aa28.26■■■□□ 2.11
CCDC34-201ENST00000317945 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
CCDC34-201ENST00000317945 APLP2Q06481 763 aa28.17■■■□□ 2.1
CCDC34-201ENST00000317945 BIVM-ERCC5R4GMW8 1640 aa28.17■■■□□ 2.1
CCDC34-201ENST00000317945 ERICH3Q5RHP9 1530 aa28.15■■■□□ 2.1
CCDC34-201ENST00000317945 PRXQ9BXM0 1461 aa28.06■■■□□ 2.08
CCDC34-201ENST00000317945 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
CCDC34-201ENST00000317945 HMGXB3Q12766 1538 aa28.03■■■□□ 2.08
CCDC34-201ENST00000317945 CLSPNQ9HAW4 1339 aa28.03■■■□□ 2.08
CCDC34-201ENST00000317945 GTF3C3Q9Y5Q9 886 aa28.01■■■□□ 2.08
CCDC34-201ENST00000317945 NCAPD3P42695 1498 aa28■■■□□ 2.07
CCDC34-201ENST00000317945 ARAP1Q96P48 1450 aa27.9■■■□□ 2.06
CCDC34-201ENST00000317945 KIF27Q86VH2 1401 aa27.86■■■□□ 2.05
CCDC34-201ENST00000317945 CUX1P39880 1505 aa27.84■■■□□ 2.05
CCDC34-201ENST00000317945 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
CCDC34-201ENST00000317945 CFTRP13569 1480 aa27.8■■■□□ 2.04
CCDC34-201ENST00000317945 RRBP1Q9P2E9 1410 aaKnown RBP27.78■■■□□ 2.04
CCDC34-201ENST00000317945 MIER1Q8N108 512 aa27.77■■■□□ 2.04
CCDC34-201ENST00000317945 DHX57Q6P158 1386 aaKnown RBP27.75■■■□□ 2.03
CCDC34-201ENST00000317945 CUX2O14529 1486 aa27.73■■■□□ 2.03
CCDC34-201ENST00000317945 RANGAP1P46060 587 aaPredicted RBP27.71■■■□□ 2.03
CCDC34-201ENST00000317945 KANK4Q5T7N3 995 aaPredicted RBP27.65■■■□□ 2.02
CCDC34-201ENST00000317945 ARHGAP35Q9NRY4 1499 aa27.62■■■□□ 2.01
CCDC34-201ENST00000317945 MAP3K1Q13233 1512 aa27.59■■■□□ 2.01
CCDC34-201ENST00000317945 PRDM2Q13029 1718 aa27.59■■■□□ 2.01
CCDC34-201ENST00000317945 YTHDC1Q96MU7 727 aaKnown RBP27.59■■■□□ 2.01
CCDC34-201ENST00000317945 CCNB3Q8WWL7 1395 aa27.57■■■□□ 2
CCDC34-201ENST00000317945 IGF1RP08069 1367 aa27.49■■□□□ 1.99
CCDC34-201ENST00000317945 MYT1Q01538 1121 aa27.44■■□□□ 1.98
CCDC34-201ENST00000317945 CADPSQ9ULU8 1353 aa27.41■■□□□ 1.98
CCDC34-201ENST00000317945 TIAM1Q13009 1591 aa27.4■■□□□ 1.98
CCDC34-201ENST00000317945 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
CCDC34-201ENST00000317945 FHAD1B1AJZ9 1412 aa27.33■■□□□ 1.96
CCDC34-201ENST00000317945 LRRC9Q6ZRR7 1453 aa27.31■■□□□ 1.96
CCDC34-201ENST00000317945 FGD5Q6ZNL6 1462 aa27.3■■□□□ 1.96
CCDC34-201ENST00000317945 RAB3GAP2Q9H2M9 1393 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms