Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16■□□□□ 0.152e-6■■■■□ 24.9
DKC1O60832 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.712e-6■■■■□ 24.9
DKC1O60832 FOXP1-203ENST00000327590 5685 ntTSL 28.65□□□□□ -1.032e-6■■■■□ 24.9
DKC1O60832 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC9.17□□□□□ -0.941e-323■■■■□ 24.9
DKC1O60832 EP400-208ENST00000611841 3129 ntTSL 512.12□□□□□ -0.474e-49■■■■□ 24.9
DKC1O60832 SNORA49-201ENST00000386157 136 ntBASIC-1.07□□□□□ -2.584e-49■■■■□ 24.9
DKC1O60832 MIR664B-201ENST00000626756 61 ntBASIC-1.95□□□□□ -2.721e-323■■■■□ 24.9
DKC1O60832 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.81■□□□□ 0.764e-6■■■■□ 24.8
DKC1O60832 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.384e-6■■■■□ 24.8
DKC1O60832 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.32■□□□□ 0.044e-6■■■■□ 24.8
DKC1O60832 SYNJ2-203ENST00000367113 939 ntTSL 28.9□□□□□ -0.986e-9■■■■□ 24.8
DKC1O60832 SYNJ2-205ENST00000449320 680 ntTSL 48.64□□□□□ -1.036e-9■■■■□ 24.8
DKC1O60832 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.427e-7■■■■□ 24.7
DKC1O60832 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.13■□□□□ 0.813e-7■■■■□ 24.7
DKC1O60832 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.323e-7■■■■□ 24.7
DKC1O60832 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.855e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-212ENST00000541765 630 ntTSL 524.55■■□□□ 1.525e-10■■■■□ 24.7
DKC1O60832 REEP6-202ENST00000395479 739 ntAPPRIS ALT2 TSL 320.27■□□□□ 0.845e-10■■■■□ 24.7
DKC1O60832 MPRIP-207ENST00000429184 914 ntTSL 518.14■□□□□ 0.495e-10■■■■□ 24.7
DKC1O60832 MPRIP-201ENST00000313485 6050 ntTSL 518.1■□□□□ 0.495e-10■■■■□ 24.7
DKC1O60832 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.65■□□□□ 0.426e-9■■■■□ 24.7
DKC1O60832 MPRIP-219ENST00000584067 3195 ntTSL 1 (best)15.48■□□□□ 0.075e-10■■■■□ 24.7
DKC1O60832 REEP6-203ENST00000395484 611 ntTSL 513.24□□□□□ -0.295e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-205ENST00000454014 4398 ntTSL 1 (best)13.23□□□□□ -0.295e-10■■■■□ 24.7
DKC1O60832 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.296e-9■■■■□ 24.7
DKC1O60832 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.316e-9■■■■□ 24.7
DKC1O60832 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC12.86□□□□□ -0.355e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-201ENST00000298892 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.395e-10■■■■□ 24.7
DKC1O60832 MPRIP-206ENST00000414263 4043 ntTSL 211.32□□□□□ -0.65e-10■■■■□ 24.7
DKC1O60832 MPRIP-215ENST00000579832 438 ntTSL 311.23□□□□□ -0.615e-10■■■■□ 24.7
DKC1O60832 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC11.04□□□□□ -0.646e-9■■■■□ 24.7
DKC1O60832 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC10.55□□□□□ -0.726e-9■■■■□ 24.7
DKC1O60832 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC10.11□□□□□ -0.796e-7■■■■□ 24.7
DKC1O60832 MPRIP-208ENST00000462033 309 ntTSL 29.73□□□□□ -0.855e-10■■■■□ 24.7
DKC1O60832 MPRIP-211ENST00000578209 751 ntTSL 38.74□□□□□ -1.015e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-204ENST00000433722 3012 ntTSL 1 (best)8.06□□□□□ -1.125e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-207ENST00000537108 2187 ntTSL 57.92□□□□□ -1.145e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-208ENST00000537553 6543 ntTSL 27.82□□□□□ -1.165e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-216ENST00000548676 3221 ntTSL 1 (best)6.88□□□□□ -1.315e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.55□□□□□ -1.365e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.44□□□□□ -1.385e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-209ENST00000538387 882 ntTSL 34.86□□□□□ -1.635e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-214ENST00000543380 628 ntTSL 54.18□□□□□ -1.745e-10■■■■□ 24.7
DKC1O60832 CAPRIN2-206ENST00000534897 478 ntTSL 41.17□□□□□ -2.225e-10■■■■□ 24.7
DKC1O60832 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.264e-14■■■■□ 24.7
DKC1O60832 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.96■■□□□ 1.594e-14■■■■□ 24.7
DKC1O60832 ENKD1-203ENST00000602415 735 ntTSL 319■□□□□ 0.634e-14■■■■□ 24.7
DKC1O60832 ENKD1-205ENST00000602642 468 ntTSL 217.87■□□□□ 0.454e-14■■■■□ 24.7
DKC1O60832 ENKD1-207ENST00000602942 1253 ntTSL 1 (best)11.79□□□□□ -0.524e-14■■■■□ 24.7
DKC1O60832 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.023e-79■■■■□ 24.6
DKC1O60832 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.063e-79■■■■□ 24.6
DKC1O60832 UBAP2-212ENST00000629575 3460 ntTSL 28.28□□□□□ -1.083e-79■■■■□ 24.6
DKC1O60832 FNDC3B-207ENST00000469491 2916 ntTSL 218.53■□□□□ 0.562e-18■■■■□ 24.6
DKC1O60832 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.372e-18■■■■□ 24.6
DKC1O60832 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.712e-18■■■■□ 24.6
DKC1O60832 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.012e-18■■■■□ 24.6
DKC1O60832 SOX13-209ENST00000534185 723 ntTSL 526.25■■□□□ 1.791e-9■■■■□ 24.5
DKC1O60832 SOX13-208ENST00000530882 769 ntTSL 324.63■■□□□ 1.531e-9■■■■□ 24.5
DKC1O60832 SOX13-206ENST00000525442 538 ntTSL 419.07■□□□□ 0.641e-9■■■■□ 24.5
DKC1O60832 SOX13-202ENST00000367203 3525 ntTSL 1 (best)17.69■□□□□ 0.421e-9■■■■□ 24.5
DKC1O60832 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.321e-9■■■■□ 24.5
DKC1O60832 SOX13-207ENST00000528591 597 ntTSL 49.79□□□□□ -0.841e-9■■■■□ 24.5
DKC1O60832 SNORD24-201ENST00000383884 75 ntBASIC0.51□□□□□ -2.331e-323■■■■□ 24.5
DKC1O60832 MAD1L1-205ENST00000421113 564 ntTSL 421.76■■□□□ 1.074e-7■■■■□ 24.5
DKC1O60832 MAD1L1-210ENST00000444373 535 ntTSL 417.47■□□□□ 0.394e-7■■■■□ 24.5
DKC1O60832 SNORD99-201ENST00000408612 74 ntBASIC0.79□□□□□ -2.281e-323■■■■□ 24.5
DKC1O60832 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.243e-6■■■■□ 24.5
DKC1O60832 KLHDC4-207ENST00000562155 1757 ntTSL 522.2■■□□□ 1.143e-6■■■■□ 24.5
DKC1O60832 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.13e-6■■■■□ 24.5
DKC1O60832 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.81■■□□□ 1.083e-6■■■■□ 24.5
DKC1O60832 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.82■□□□□ 0.923e-6■■■■□ 24.5
DKC1O60832 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)20.35■□□□□ 0.853e-6■■■■□ 24.5
DKC1O60832 KLHDC4-215ENST00000566349 1377 ntTSL 219.46■□□□□ 0.713e-6■■■■□ 24.5
DKC1O60832 KLHDC4-217ENST00000566661 2232 ntTSL 518.66■□□□□ 0.583e-6■■■■□ 24.5
DKC1O60832 KLHDC4-208ENST00000562261 1065 ntTSL 317.03■□□□□ 0.323e-6■■■■□ 24.5
DKC1O60832 KLHDC4-212ENST00000564396 563 ntTSL 516.09■□□□□ 0.173e-6■■■■□ 24.5
DKC1O60832 KLHDC4-218ENST00000567298 4572 ntTSL 515.93■□□□□ 0.143e-6■■■■□ 24.5
DKC1O60832 KLHDC4-226ENST00000569747 560 ntTSL 415.26■□□□□ 0.033e-6■■■■□ 24.5
DKC1O60832 KLHDC4-214ENST00000565328 582 ntTSL 414.48□□□□□ -0.093e-6■■■■□ 24.5
DKC1O60832 KLHDC4-213ENST00000564484 562 ntTSL 511.66□□□□□ -0.543e-6■■■■□ 24.5
DKC1O60832 KLHDC4-219ENST00000567513 585 ntTSL 48.66□□□□□ -1.023e-6■■■■□ 24.5
DKC1O60832 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.44■■□□□ 1.341e-6■■■■□ 24.4
DKC1O60832 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.261e-6■■■■□ 24.4
DKC1O60832 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.054e-12■■■■□ 24.3
DKC1O60832 EXOC3L4-207ENST00000560925 2341 ntTSL 225.78■■□□□ 1.724e-12■■■■□ 24.3
DKC1O60832 CNOT6L-207ENST00000515441 572 ntTSL 416.85■□□□□ 0.292e-7■■■■□ 24.3
DKC1O60832 CNOT6L-204ENST00000506166 781 ntTSL 212.15□□□□□ -0.462e-7■■■■□ 24.3
DKC1O60832 CNOT6L-202ENST00000504804 1925 ntTSL 56.4□□□□□ -1.382e-7■■■■□ 24.3
DKC1O60832 CNOT6L-206ENST00000512485 1890 ntTSL 56.3□□□□□ -1.42e-7■■■■□ 24.3
DKC1O60832 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.752e-7■■■■□ 24.3
DKC1O60832 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.313e-14■■■■□ 24.3
DKC1O60832 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.65■□□□□ 0.13e-14■■■■□ 24.3
DKC1O60832 FTX-211ENST00000603672 1077 ntTSL 514.08□□□□□ -0.163e-14■■■■□ 24.3
DKC1O60832 C2orf72-203ENST00000477463 579 ntTSL 413.34□□□□□ -0.273e-14■■■■□ 24.3
DKC1O60832 C2orf72-202ENST00000463834 3141 ntTSL 1 (best)12.25□□□□□ -0.453e-14■■■■□ 24.3
DKC1O60832 FTX-209ENST00000602812 2356 ntTSL 1 (best)11.36□□□□□ -0.593e-14■■■■□ 24.3
DKC1O60832 FTX-215ENST00000638681 9771 ntTSL 5 BASIC10.55□□□□□ -0.723e-14■■■■□ 24.3
DKC1O60832 FTX-206ENST00000602420 751 ntTSL 36.18□□□□□ -1.423e-14■■■■□ 24.3
DKC1O60832 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.59□□□□□ -1.513e-14■■■■□ 24.3
DKC1O60832 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.194e-9■■■■□ 24.1
Retrieved 100 of 8,567 protein–RNA pairs in 130.4 ms