RNA–Protein interactions for RNA: ENST00000252999.7

LAMA5-201, Transcript of laminin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA5, Length 11,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-201ENST00000252999 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
LAMA5-201ENST00000252999 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
LAMA5-201ENST00000252999 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
LAMA5-201ENST00000252999 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
LAMA5-201ENST00000252999 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
LAMA5-201ENST00000252999 CCER1Q8TC90 406 aaPredicted RBP17.8■□□□□ 0.44
LAMA5-201ENST00000252999 APLP2Q06481 763 aa17.69■□□□□ 0.42
LAMA5-201ENST00000252999 CENPBP07199 599 aaPredicted RBP17.66■□□□□ 0.42
LAMA5-201ENST00000252999 SHROOM4Q9ULL8 1493 aa17.64■□□□□ 0.41
LAMA5-201ENST00000252999 MYT1Q01538 1121 aa17.63■□□□□ 0.41
LAMA5-201ENST00000252999 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
LAMA5-201ENST00000252999 PCGF6Q9BYE7 350 aa17.5■□□□□ 0.39
LAMA5-201ENST00000252999 NEFLP07196 543 aa17.42■□□□□ 0.38
LAMA5-201ENST00000252999 YTHDC1Q96MU7 727 aaKnown RBP17.35■□□□□ 0.37
LAMA5-201ENST00000252999 FAM9AQ8IZU1 332 aaPredicted RBP17.27■□□□□ 0.36
LAMA5-201ENST00000252999 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
LAMA5-201ENST00000252999 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
LAMA5-201ENST00000252999 DAXXQ9UER7 740 aaPredicted RBP17.15■□□□□ 0.34
LAMA5-201ENST00000252999 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
LAMA5-201ENST00000252999 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
LAMA5-201ENST00000252999 ZNF316A6NFI3 1004 aaPredicted RBP16.74■□□□□ 0.27
LAMA5-201ENST00000252999 UBTFP17480 764 aaKnown RBP16.71■□□□□ 0.27
LAMA5-201ENST00000252999 POLR3GLQ9BT43 218 aa16.71■□□□□ 0.27
LAMA5-201ENST00000252999 PPARGC1BQ86YN6 1023 aaKnown RBP16.66■□□□□ 0.26
LAMA5-201ENST00000252999 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
LAMA5-201ENST00000252999 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
LAMA5-201ENST00000252999 NISCHQ9Y2I1 1504 aa16.59■□□□□ 0.25
LAMA5-201ENST00000252999 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
LAMA5-201ENST00000252999 HRCP23327 699 aa16.51■□□□□ 0.23
LAMA5-201ENST00000252999 ITGAEP38570 1179 aa16.43■□□□□ 0.22
LAMA5-201ENST00000252999 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
LAMA5-201ENST00000252999 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
LAMA5-201ENST00000252999 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
LAMA5-201ENST00000252999 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
LAMA5-201ENST00000252999 BCANQ96GW7 911 aa16.29■□□□□ 0.2
LAMA5-201ENST00000252999 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
LAMA5-201ENST00000252999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
LAMA5-201ENST00000252999 DIEXFQ68CQ4 756 aaKnown RBP16.2■□□□□ 0.18
LAMA5-201ENST00000252999 EIF5BO60841 1220 aaKnown RBP16.19■□□□□ 0.18
LAMA5-201ENST00000252999 BCL11AQ9H165 835 aa16.15■□□□□ 0.18
LAMA5-201ENST00000252999 CDK11AQ9UQ88 783 aaPredicted RBP16.12■□□□□ 0.17
LAMA5-201ENST00000252999 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
LAMA5-201ENST00000252999 GTF3C3Q9Y5Q9 886 aa16.09■□□□□ 0.17
LAMA5-201ENST00000252999 CANXP27824 592 aaKnown RBP15.99■□□□□ 0.15
LAMA5-201ENST00000252999 ANP32AP39687 249 aaKnown RBP15.97■□□□□ 0.15
LAMA5-201ENST00000252999 GLIPR1L2Q4G1C9 344 aa15.97■□□□□ 0.15
LAMA5-201ENST00000252999 NPM2Q86SE8 214 aaKnown RBP15.94■□□□□ 0.14
LAMA5-201ENST00000252999 LOC105371045A0A1W2PR82 267 aa15.93■□□□□ 0.14
LAMA5-201ENST00000252999 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
LAMA5-201ENST00000252999 ANP32BQ92688 251 aaKnown RBP15.91■□□□□ 0.14
LAMA5-201ENST00000252999 ANP32CO43423 234 aa15.88■□□□□ 0.13
LAMA5-201ENST00000252999 NEUROD1Q13562 356 aa15.87■□□□□ 0.13
LAMA5-201ENST00000252999 ZNF326Q5BKZ1 582 aaKnown RBP15.85■□□□□ 0.13
LAMA5-201ENST00000252999 FAM50AQ14320 339 aaKnown RBP15.84■□□□□ 0.13
LAMA5-201ENST00000252999 HSP90AA1P07900 732 aaKnown RBP15.81■□□□□ 0.12
LAMA5-201ENST00000252999 TRIM52Q96A61 297 aa15.79■□□□□ 0.12
LAMA5-201ENST00000252999 ARXQ96QS3 562 aa15.75■□□□□ 0.11
LAMA5-201ENST00000252999 NBR1Q14596 966 aa15.72■□□□□ 0.11
LAMA5-201ENST00000252999 NEFMP07197 916 aa15.65■□□□□ 0.1
LAMA5-201ENST00000252999 ACIN1Q9UKV3 1341 aaKnown RBP15.65■□□□□ 0.1
LAMA5-201ENST00000252999 UPF2Q9HAU5 1272 aaKnown RBP15.6■□□□□ 0.09
LAMA5-201ENST00000252999 FKBP8Q14318 412 aa15.54■□□□□ 0.08
LAMA5-201ENST00000252999 CDK11BP21127 795 aaKnown RBP15.45■□□□□ 0.06
LAMA5-201ENST00000252999 TNNT2P45379 298 aaPredicted RBP15.44■□□□□ 0.06
LAMA5-201ENST00000252999 CCDC136Q96JN2 1154 aa15.38■□□□□ 0.05
LAMA5-201ENST00000252999 HNRNPUQ00839 825 aaKnown RBP eCLIP15.37■□□□□ 0.05
LAMA5-201ENST00000252999 SALL2Q9Y467 1007 aaPredicted RBP15.34■□□□□ 0.05
LAMA5-201ENST00000252999 TRIM44Q96DX7 344 aaPredicted RBP15.33■□□□□ 0.04
LAMA5-201ENST00000252999 FAM9BQ8IZU0 186 aa15.32■□□□□ 0.04
LAMA5-201ENST00000252999 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.32■□□□□ 0.04
LAMA5-201ENST00000252999 PTMAP06454 111 aaKnown RBP15.26■□□□□ 0.03
LAMA5-201ENST00000252999 IRX6P78412 446 aaPredicted RBP15.26■□□□□ 0.03
LAMA5-201ENST00000252999 NAP1L5Q96NT1 182 aaPredicted RBP15.24■□□□□ 0.03
LAMA5-201ENST00000252999 ARID3CA6NKF2 412 aa15.24■□□□□ 0.03
LAMA5-201ENST00000252999 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
LAMA5-201ENST00000252999 DNTTIP2Q5QJE6 756 aaKnown RBP15.22■□□□□ 0.03
LAMA5-201ENST00000252999 TPRNQ4KMQ1 711 aa15.2■□□□□ 0.02
LAMA5-201ENST00000252999 MYH16Q9H6N6 1097 aa15.2■□□□□ 0.02
LAMA5-201ENST00000252999 NCLP19338 710 aaKnown RBP15.2■□□□□ 0.02
LAMA5-201ENST00000252999 BECN1Q14457 450 aa15.2■□□□□ 0.02
LAMA5-201ENST00000252999 AMER1Q5JTC6 1135 aaPredicted RBP15.2■□□□□ 0.02
LAMA5-201ENST00000252999 TONSLQ96HA7 1378 aa15.18■□□□□ 0.02
LAMA5-201ENST00000252999 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
LAMA5-201ENST00000252999 GOLGA6L22H0YM25 854 aa15.16■□□□□ 0.02
LAMA5-201ENST00000252999 DDRGK1Q96HY6 314 aa15.15■□□□□ 0.02
LAMA5-201ENST00000252999 FBLN2P98095 1184 aa15.15■□□□□ 0.02
LAMA5-201ENST00000252999 TULP1O00294 542 aaPredicted RBP15.14■□□□□ 0.01
LAMA5-201ENST00000252999 ZNF777Q9ULD5 760 aaPredicted RBP15.14■□□□□ 0.01
LAMA5-201ENST00000252999 TMC1Q8TDI8 760 aa15.14■□□□□ 0.01
LAMA5-201ENST00000252999 SCAF1Q9H7N4 1312 aaKnown RBP15.14■□□□□ 0.01
LAMA5-201ENST00000252999 ZRSR1Q15695 479 aaKnown RBP15.13■□□□□ 0.01
LAMA5-201ENST00000252999 ANP32EQ9BTT0 268 aa15.12■□□□□ 0.01
LAMA5-201ENST00000252999 ERICH6BQ5W0A0 696 aa15.11■□□□□ 0.01
LAMA5-201ENST00000252999 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
LAMA5-201ENST00000252999 WDR43Q15061 677 aaKnown RBP eCLIP15.1■□□□□ 0.016e-7■■■■□ 22
LAMA5-201ENST00000252999 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
LAMA5-201ENST00000252999 P3H3Q8IVL6 736 aa15.09■□□□□ 0.01
LAMA5-201ENST00000252999 A0A0G2JS52 829 aa15.09■□□□□ 0.01
LAMA5-201ENST00000252999 STAG3Q9UJ98 1225 aa15.09■□□□□ 0.01
LAMA5-201ENST00000252999 MRS2Q9HD23 443 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms