Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DUX1O43812 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.1■□□□□ 0.81
DUX1O43812 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
DUX1O43812 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
DUX1O43812 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DUX1O43812 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUX1O43812 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
DUX1O43812 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.09■□□□□ 0.81
DUX1O43812 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.09■□□□□ 0.81
DUX1O43812 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUX1O43812 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUX1O43812 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DUX1O43812 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DUX1O43812 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUX1O43812 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
DUX1O43812 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DUX1O43812 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUX1O43812 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
DUX1O43812 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
DUX1O43812 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DUX1O43812 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DUX1O43812 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.08■□□□□ 0.81
DUX1O43812 RNA5SP413-201ENST00000516373 109 ntBASIC20.08■□□□□ 0.81
DUX1O43812 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DUX1O43812 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DUX1O43812 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
DUX1O43812 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
DUX1O43812 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
DUX1O43812 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
DUX1O43812 GUSBP5-202ENST00000510805 1989 ntBASIC20.07■□□□□ 0.8
DUX1O43812 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
DUX1O43812 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
DUX1O43812 FAM201B-201ENST00000458407 597 ntBASIC20.07■□□□□ 0.8
DUX1O43812 AC097658.1-201ENST00000475555 843 ntBASIC20.07■□□□□ 0.8
DUX1O43812 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.07■□□□□ 0.8
DUX1O43812 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.07■□□□□ 0.8
DUX1O43812 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DUX1O43812 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.06■□□□□ 0.8
DUX1O43812 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DUX1O43812 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX1O43812 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX1O43812 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX1O43812 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.06■□□□□ 0.8
DUX1O43812 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
DUX1O43812 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.06■□□□□ 0.8
DUX1O43812 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.06■□□□□ 0.8
DUX1O43812 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.06■□□□□ 0.8
DUX1O43812 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.06■□□□□ 0.8
DUX1O43812 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.06■□□□□ 0.8
DUX1O43812 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DUX1O43812 AC233723.2-201ENST00000623798 2106 ntBASIC20.06■□□□□ 0.8
DUX1O43812 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX1O43812 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DUX1O43812 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DUX1O43812 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.05■□□□□ 0.8
DUX1O43812 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
DUX1O43812 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.05■□□□□ 0.8
DUX1O43812 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
DUX1O43812 LSM12P1-201ENST00000411836 588 ntBASIC20.05■□□□□ 0.8
DUX1O43812 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.05■□□□□ 0.8
DUX1O43812 AC091874.3-201ENST00000512672 1195 ntBASIC20.05■□□□□ 0.8
DUX1O43812 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.05■□□□□ 0.8
DUX1O43812 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
DUX1O43812 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.05■□□□□ 0.8
DUX1O43812 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DUX1O43812 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX1O43812 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX1O43812 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DUX1O43812 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DUX1O43812 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.04■□□□□ 0.8
DUX1O43812 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.04■□□□□ 0.8
DUX1O43812 DUSP5P2-201ENST00000426873 1033 ntBASIC20.04■□□□□ 0.8
DUX1O43812 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
DUX1O43812 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.04■□□□□ 0.8
DUX1O43812 AC100791.3-201ENST00000617619 330 ntBASIC20.04■□□□□ 0.8
DUX1O43812 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DUX1O43812 MYC-209ENST00000641252 345 ntBASIC20.04■□□□□ 0.8
DUX1O43812 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
DUX1O43812 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms