Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 DUX4L4-201ENST00000566884 1269 ntBASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-6A0A0B4J262 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV8-6A0A0B4J262 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 DUX4L19-201ENST00000557448 1267 ntBASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 AC008406.3-201ENST00000620001 1374 ntBASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV8-6A0A0B4J262 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 LINC01006-201ENST00000333319 2292 ntBASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV8-6A0A0B4J262 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 AC090340.1-201ENST00000620778 4980 ntBASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV8-6A0A0B4J262 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV8-6A0A0B4J262 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms