Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV23-1A0A0A0MS06 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRBV23-1A0A0A0MS06 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.6■□□□□ 0.41
TRBV23-1A0A0A0MS06 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV23-1A0A0A0MS06 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV23-1A0A0A0MS06 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 AC104564.3-201ENST00000582367 638 ntBASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV23-1A0A0A0MS06 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.58■□□□□ 0.41
TRBV23-1A0A0A0MS06 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TRBV23-1A0A0A0MS06 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.58■□□□□ 0.41
TRBV23-1A0A0A0MS06 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV23-1A0A0A0MS06 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV23-1A0A0A0MS06 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV23-1A0A0A0MS06 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 AC087623.3-201ENST00000607047 1098 ntBASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV23-1A0A0A0MS06 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 DUX4L2-201ENST00000561772 1275 ntBASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 DUX4L6-201ENST00000626483 1275 ntBASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 DUX4L1-201ENST00000627662 1275 ntBASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 DUX4L8-201ENST00000629013 1275 ntBASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 DUX4L3-201ENST00000630187 1275 ntBASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 DUX4L7-201ENST00000630678 1275 ntBASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 DUX4L5-201ENST00000630834 1275 ntBASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRBV23-1A0A0A0MS06 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 AC003102.1-202ENST00000563394 1796 ntBASIC17.56■□□□□ 0.4
TRBV23-1A0A0A0MS06 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV23-1A0A0A0MS06 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms