Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 AC026366.1-201ENST00000488803 879 ntBASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
PCDHAC2Q9Y5I4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHAC2Q9Y5I4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHAC2Q9Y5I4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHAC2Q9Y5I4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHAC2Q9Y5I4 AC008403.3-201ENST00000598924 454 ntBASIC25.11■■□□□ 1.61
PCDHAC2Q9Y5I4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHAC2Q9Y5I4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.11■■□□□ 1.61
PCDHAC2Q9Y5I4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHAC2Q9Y5I4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHAC2Q9Y5I4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 AP003097.1-201ENST00000530657 1135 ntBASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
PCDHAC2Q9Y5I4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 CYP2T3P-201ENST00000601990 817 ntBASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHAC2Q9Y5I4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PCDHAC2Q9Y5I4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHAC2Q9Y5I4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 AC068473.5-201ENST00000616428 2072 ntBASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHAC2Q9Y5I4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 FAM21FP-204ENST00000608637 956 ntBASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
PCDHAC2Q9Y5I4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms