Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 POU5F1P4-201ENST00000413175 1085 ntBASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 NTF6G-201ENST00000591094 616 ntBASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 SLC7A5P2-201ENST00000553010 536 ntBASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 AC008175.2-201ENST00000612840 297 ntBASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.38■■□□□ 1.33
BLOC1S4Q9NUP1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
BLOC1S4Q9NUP1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 KRT18P5-201ENST00000436075 1291 ntBASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BLOC1S4Q9NUP1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.35■■□□□ 1.33
BLOC1S4Q9NUP1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
BLOC1S4Q9NUP1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BLOC1S4Q9NUP1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
BLOC1S4Q9NUP1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.33■■□□□ 1.33
BLOC1S4Q9NUP1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BLOC1S4Q9NUP1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.33■■□□□ 1.33
BLOC1S4Q9NUP1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.33■■□□□ 1.33
BLOC1S4Q9NUP1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BLOC1S4Q9NUP1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.33■■□□□ 1.32
BLOC1S4Q9NUP1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
BLOC1S4Q9NUP1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.33■■□□□ 1.32
BLOC1S4Q9NUP1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
BLOC1S4Q9NUP1 KRT16P2-201ENST00000414673 1423 ntBASIC23.33■■□□□ 1.32
BLOC1S4Q9NUP1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
BLOC1S4Q9NUP1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.33■■□□□ 1.32
BLOC1S4Q9NUP1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 KRT19P1-201ENST00000405746 1186 ntBASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.32■■□□□ 1.32
BLOC1S4Q9NUP1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms