Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT78Q8N1N4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 AC008175.2-201ENST00000612840 297 ntBASIC20.21■□□□□ 0.83
KRT78Q8N1N4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 AC019069.1-201ENST00000610008 1333 ntBASIC20.21■□□□□ 0.83
KRT78Q8N1N4 FEM1AP4-201ENST00000443167 1987 ntBASIC20.21■□□□□ 0.83
KRT78Q8N1N4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT78Q8N1N4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT78Q8N1N4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT78Q8N1N4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 AC138907.5-202ENST00000569484 235 ntBASIC20.18■□□□□ 0.82
KRT78Q8N1N4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT78Q8N1N4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.17■□□□□ 0.82
KRT78Q8N1N4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 AL024507.2-201ENST00000606070 2574 ntBASIC20.17■□□□□ 0.82
KRT78Q8N1N4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT78Q8N1N4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 AC097381.1-201ENST00000429019 1296 ntBASIC20.16■□□□□ 0.82
KRT78Q8N1N4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT78Q8N1N4 AP004607.4-201ENST00000530158 1459 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms