Protein–RNA interactions for Protein: Q03855

TY1B-DR1, Transposon Ty1-DR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR1Q03855 GNT1YOR320C 1476 nt2.3□□□□□ -2.04
TY1B-DR1Q03855 YEL032C-AYEL032C-A 162 nt2.3□□□□□ -2.04
TY1B-DR1Q03855 YLR462WYLR462W 609 nt2.3□□□□□ -2.04
TY1B-DR1Q03855 MSH5YDL154W 2706 nt2.3□□□□□ -2.04
TY1B-DR1Q03855 NNT1YLR285W 786 nt2.29□□□□□ -2.04
TY1B-DR1Q03855 SIR3YLR442C 2937 nt2.29□□□□□ -2.04
TY1B-DR1Q03855 PRP6YBR055C 2700 nt2.29□□□□□ -2.04
TY1B-DR1Q03855 BNI1YNL271C 5862 nt2.29□□□□□ -2.04
TY1B-DR1Q03855 NDL1YLR254C 570 nt2.28□□□□□ -2.04
TY1B-DR1Q03855 GLG2YJL137C 1143 nt2.28□□□□□ -2.04
TY1B-DR1Q03855 HHF2YNL030W 312 nt2.28□□□□□ -2.04
TY1B-DR1Q03855 YBR090CYBR090C 369 nt2.28□□□□□ -2.04
TY1B-DR1Q03855 YOR192C-BYOR192C-B 5313 nt2.28□□□□□ -2.05
TY1B-DR1Q03855 CSH1YBR161W 1131 nt2.27□□□□□ -2.05
TY1B-DR1Q03855 CFT2YLR115W 2580 nt2.27□□□□□ -2.05
TY1B-DR1Q03855 SWA2YDR320C 2007 nt2.27□□□□□ -2.05
TY1B-DR1Q03855 DUF1YOL087C 3351 nt2.27□□□□□ -2.05
TY1B-DR1Q03855 YBP1YBR216C 2025 nt2.27□□□□□ -2.05
TY1B-DR1Q03855 IRE1YHR079C 3348 nt2.26□□□□□ -2.05
TY1B-DR1Q03855 YBL096CYBL096C 309 nt2.26□□□□□ -2.05
TY1B-DR1Q03855 YJL113WYJL113W 4647 nt2.26□□□□□ -2.05
TY1B-DR1Q03855 UBP8YMR223W 1416 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 tH(GUG)E1tH(GUG)E1 72 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 tH(GUG)E2tH(GUG)E2 72 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 tH(GUG)G1tH(GUG)G1 72 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 tH(GUG)G2tH(GUG)G2 72 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 tH(GUG)HtH(GUG)H 72 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 tH(GUG)KtH(GUG)K 72 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 tH(GUG)MtH(GUG)M 72 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 TAM41YGR046W 1158 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 MRPL33YMR286W 261 nt2.24□□□□□ -2.05
TY1B-DR1Q03855 SLX9YGR081C 633 nt2.23□□□□□ -2.05
TY1B-DR1Q03855 YBL029C-AYBL029C-A 285 nt2.23□□□□□ -2.05
TY1B-DR1Q03855 YPR177CYPR177C 372 nt2.23□□□□□ -2.05
TY1B-DR1Q03855 PHR1YOR386W 1698 nt2.23□□□□□ -2.05
TY1B-DR1Q03855 CSF1YLR087C 8877 nt2.23□□□□□ -2.05
TY1B-DR1Q03855 YIL102CYIL102C 306 nt2.23□□□□□ -2.05
TY1B-DR1Q03855 YML003WYML003W 873 nt2.23□□□□□ -2.05
TY1B-DR1Q03855 INA17YPL099C 549 nt2.23□□□□□ -2.05
TY1B-DR1Q03855 ORC2YBR060C 1863 nt2.22□□□□□ -2.05
TY1B-DR1Q03855 ATP17YDR377W 306 nt2.22□□□□□ -2.05
TY1B-DR1Q03855 DSN1YIR010W 1731 nt2.22□□□□□ -2.05
TY1B-DR1Q03855 OST1YJL002C 1431 nt2.22□□□□□ -2.05
TY1B-DR1Q03855 APM3YBR288C 1452 nt2.22□□□□□ -2.05
TY1B-DR1Q03855 PCK1YKR097W 1650 nt2.21□□□□□ -2.05
TY1B-DR1Q03855 RPS18AYDR450W 441 nt2.21□□□□□ -2.06
TY1B-DR1Q03855 SMY2YBR172C 2223 nt2.21□□□□□ -2.06
TY1B-DR1Q03855 PEX21YGR239C 867 nt2.21□□□□□ -2.06
TY1B-DR1Q03855 YJL015CYJL015C 285 nt2.21□□□□□ -2.06
TY1B-DR1Q03855 CLU1YMR012W 3834 nt2.21□□□□□ -2.06
TY1B-DR1Q03855 MAC1YMR021C 1254 nt2.21□□□□□ -2.06
TY1B-DR1Q03855 SYC1YOR179C 567 nt2.21□□□□□ -2.06
TY1B-DR1Q03855 YDR098C-BYDR098C-B 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YDR210C-DYDR210C-D 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YDR316W-BYDR316W-B 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YDR365W-BYDR365W-B 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YER138CYER138C 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YER160CYER160C 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YGR038C-BYGR038C-B 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YGR161C-DYGR161C-D 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YJR027WYJR027W 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YLR157C-BYLR157C-B 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YML039WYML039W 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YML045WYML045W 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YMR050CYMR050C 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YOL103W-BYOL103W-B 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YBR012W-BYBR012W-B 5271 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YOR142W-BYOR142W-B 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YPL257W-BYPL257W-B 5268 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YPR158W-BYPR158W-B 5271 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 GSH2YOL049W 1476 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 TOP2YNL088W 4287 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 MIG1YGL035C 1515 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 VPS35YJL154C 2835 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 SSN8YNL025C 972 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 YNL035CYNL035C 1170 nt2.2□□□□□ -2.06
TY1B-DR1Q03855 MCD1YDL003W 1701 nt2.19□□□□□ -2.06
TY1B-DR1Q03855 UBP3YER151C 2739 nt2.19□□□□□ -2.06
TY1B-DR1Q03855 CCM1YGR150C 2595 nt2.19□□□□□ -2.06
TY1B-DR1Q03855 SCL1YGL011C 759 nt2.19□□□□□ -2.06
TY1B-DR1Q03855 YHI9YHR029C 885 nt2.19□□□□□ -2.06
TY1B-DR1Q03855 PKR1YMR123W 369 nt2.19□□□□□ -2.06
TY1B-DR1Q03855 VMA9YCL005W-A 222 nt2.19□□□□□ -2.06
TY1B-DR1Q03855 BUD3YCL014W 4911 nt2.19□□□□□ -2.06
TY1B-DR1Q03855 APM1YPL259C 1428 nt2.19□□□□□ -2.06
TY1B-DR1Q03855 DAS2YDR020C 699 nt2.18□□□□□ -2.06
TY1B-DR1Q03855 YHR071C-AYHR071C-A 321 nt2.18□□□□□ -2.06
TY1B-DR1Q03855 YKR047WYKR047W 306 nt2.17□□□□□ -2.06
TY1B-DR1Q03855 TAF14YPL129W 735 nt2.17□□□□□ -2.06
TY1B-DR1Q03855 ELG1YOR144C 2376 nt2.17□□□□□ -2.06
TY1B-DR1Q03855 NEL1YHR035W 1893 nt2.16□□□□□ -2.06
TY1B-DR1Q03855 SPO75YLL005C 2607 nt2.16□□□□□ -2.06
TY1B-DR1Q03855 EAF5YEL018W 840 nt2.16□□□□□ -2.06
TY1B-DR1Q03855 TPM2YIL138C 486 nt2.16□□□□□ -2.06
TY1B-DR1Q03855 ERP1YAR002C-A 660 nt2.16□□□□□ -2.06
TY1B-DR1Q03855 PSY3YLR376C 729 nt2.16□□□□□ -2.06
TY1B-DR1Q03855 COS3YML132W 1140 nt2.16□□□□□ -2.06
TY1B-DR1Q03855 PIS1YPR113W 663 nt2.16□□□□□ -2.06
TY1B-DR1Q03855 COS2YBR302C 1140 nt2.16□□□□□ -2.06
TY1B-DR1Q03855 ROM2YLR371W 4071 nt2.16□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 72.3 ms