Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CSNK1A1P48729 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.63■□□□□ 0.57
CSNK1A1P48729 FEM1AP4-201ENST00000443167 1987 ntBASIC18.63■□□□□ 0.57
CSNK1A1P48729 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.63■□□□□ 0.57
CSNK1A1P48729 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.63■□□□□ 0.57
CSNK1A1P48729 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.63■□□□□ 0.57
CSNK1A1P48729 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSNK1A1P48729 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1A1P48729 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1A1P48729 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 AC008175.2-201ENST00000612840 297 ntBASIC18.62■□□□□ 0.57
CSNK1A1P48729 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1A1P48729 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1A1P48729 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1A1P48729 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1A1P48729 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1A1P48729 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSNK1A1P48729 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CSNK1A1P48729 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.61■□□□□ 0.57
CSNK1A1P48729 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.61■□□□□ 0.57
CSNK1A1P48729 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.61■□□□□ 0.57
CSNK1A1P48729 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CSNK1A1P48729 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.61■□□□□ 0.57
CSNK1A1P48729 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.61■□□□□ 0.57
CSNK1A1P48729 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.61■□□□□ 0.57
CSNK1A1P48729 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 AL024507.2-201ENST00000606070 2574 ntBASIC18.61■□□□□ 0.57
CSNK1A1P48729 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.61■□□□□ 0.57
CSNK1A1P48729 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CSNK1A1P48729 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSNK1A1P48729 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.6■□□□□ 0.57
CSNK1A1P48729 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CSNK1A1P48729 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 AC097381.1-201ENST00000429019 1296 ntBASIC18.6■□□□□ 0.57
CSNK1A1P48729 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.6■□□□□ 0.57
CSNK1A1P48729 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.6■□□□□ 0.57
CSNK1A1P48729 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.6■□□□□ 0.57
CSNK1A1P48729 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.6■□□□□ 0.57
CSNK1A1P48729 AC138907.5-202ENST00000569484 235 ntBASIC18.6■□□□□ 0.57
CSNK1A1P48729 AC104187.1-201ENST00000607510 612 ntBASIC18.6■□□□□ 0.57
CSNK1A1P48729 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.6■□□□□ 0.57
CSNK1A1P48729 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CSNK1A1P48729 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSNK1A1P48729 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1A1P48729 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1A1P48729 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1A1P48729 AL137060.1-201ENST00000618151 2648 ntBASIC18.59■□□□□ 0.57
CSNK1A1P48729 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1A1P48729 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1A1P48729 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.59■□□□□ 0.57
CSNK1A1P48729 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.59■□□□□ 0.57
CSNK1A1P48729 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.59■□□□□ 0.57
CSNK1A1P48729 MIR6821-201ENST00000617625 74 ntBASIC18.59■□□□□ 0.57
CSNK1A1P48729 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1A1P48729 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1A1P48729 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.59■□□□□ 0.57
CSNK1A1P48729 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.59■□□□□ 0.57
CSNK1A1P48729 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CSNK1A1P48729 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1A1P48729 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CSNK1A1P48729 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSNK1A1P48729 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms