Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YBR090CYBR090C 369 nt2.25□□□□□ -2.05
TY1B-JR1P47098 CSH1YBR161W 1131 nt2.25□□□□□ -2.05
TY1B-JR1P47098 YJL113WYJL113W 4647 nt2.25□□□□□ -2.05
TY1B-JR1P47098 SWA2YDR320C 2007 nt2.24□□□□□ -2.05
TY1B-JR1P47098 UBP3YER151C 2739 nt2.24□□□□□ -2.05
TY1B-JR1P47098 NOP6YDL213C 678 nt2.24□□□□□ -2.05
TY1B-JR1P47098 CLU1YMR012W 3834 nt2.24□□□□□ -2.05
TY1B-JR1P47098 YBL029C-AYBL029C-A 285 nt2.23□□□□□ -2.05
TY1B-JR1P47098 YBL096CYBL096C 309 nt2.23□□□□□ -2.05
TY1B-JR1P47098 SIR3YLR442C 2937 nt2.23□□□□□ -2.05
TY1B-JR1P47098 BNI1YNL271C 5862 nt2.23□□□□□ -2.05
TY1B-JR1P47098 YBP1YBR216C 2025 nt2.23□□□□□ -2.05
TY1B-JR1P47098 SLX9YGR081C 633 nt2.23□□□□□ -2.05
TY1B-JR1P47098 HPA2YPR193C 471 nt2.23□□□□□ -2.05
TY1B-JR1P47098 PHR1YOR386W 1698 nt2.23□□□□□ -2.05
TY1B-JR1P47098 DSN1YIR010W 1731 nt2.22□□□□□ -2.05
TY1B-JR1P47098 VPS35YJL154C 2835 nt2.22□□□□□ -2.05
TY1B-JR1P47098 YML003WYML003W 873 nt2.21□□□□□ -2.06
TY1B-JR1P47098 PAN2YGL094C 3348 nt2.21□□□□□ -2.06
TY1B-JR1P47098 BUD3YCL014W 4911 nt2.21□□□□□ -2.06
TY1B-JR1P47098 tH(GUG)E1tH(GUG)E1 72 nt2.21□□□□□ -2.06
TY1B-JR1P47098 tH(GUG)E2tH(GUG)E2 72 nt2.21□□□□□ -2.06
TY1B-JR1P47098 tH(GUG)G1tH(GUG)G1 72 nt2.21□□□□□ -2.06
TY1B-JR1P47098 tH(GUG)G2tH(GUG)G2 72 nt2.21□□□□□ -2.06
TY1B-JR1P47098 tH(GUG)HtH(GUG)H 72 nt2.21□□□□□ -2.06
TY1B-JR1P47098 tH(GUG)KtH(GUG)K 72 nt2.21□□□□□ -2.06
TY1B-JR1P47098 tH(GUG)MtH(GUG)M 72 nt2.21□□□□□ -2.06
TY1B-JR1P47098 YPR177CYPR177C 372 nt2.21□□□□□ -2.06
TY1B-JR1P47098 ALG1YBR110W 1350 nt2.2□□□□□ -2.06
TY1B-JR1P47098 YIL102CYIL102C 306 nt2.2□□□□□ -2.06
TY1B-JR1P47098 APM3YBR288C 1452 nt2.2□□□□□ -2.06
TY1B-JR1P47098 YDR098C-BYDR098C-B 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YDR210C-DYDR210C-D 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YDR316W-BYDR316W-B 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YDR365W-BYDR365W-B 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YER138CYER138C 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YER160CYER160C 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YGR038C-BYGR038C-B 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YGR161C-DYGR161C-D 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YJR027WYJR027W 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YLR157C-BYLR157C-B 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YML039WYML039W 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YML045WYML045W 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YMR050CYMR050C 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YOL103W-BYOL103W-B 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YBR012W-BYBR012W-B 5271 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YOR142W-BYOR142W-B 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YPL257W-BYPL257W-B 5268 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YPR158W-BYPR158W-B 5271 nt2.19□□□□□ -2.06
TY1B-JR1P47098 TFA1YKL028W 1449 nt2.19□□□□□ -2.06
TY1B-JR1P47098 TAM41YGR046W 1158 nt2.19□□□□□ -2.06
TY1B-JR1P47098 YJL015CYJL015C 285 nt2.19□□□□□ -2.06
TY1B-JR1P47098 MRPL33YMR286W 261 nt2.19□□□□□ -2.06
TY1B-JR1P47098 DUF1YOL087C 3351 nt2.19□□□□□ -2.06
TY1B-JR1P47098 GSH2YOL049W 1476 nt2.19□□□□□ -2.06
TY1B-JR1P47098 ATP17YDR377W 306 nt2.18□□□□□ -2.06
TY1B-JR1P47098 PEX21YGR239C 867 nt2.18□□□□□ -2.06
TY1B-JR1P47098 GLG2YJL137C 1143 nt2.18□□□□□ -2.06
TY1B-JR1P47098 CLB4YLR210W 1383 nt2.18□□□□□ -2.06
TY1B-JR1P47098 YEL032C-AYEL032C-A 162 nt2.18□□□□□ -2.06
TY1B-JR1P47098 NDL1YLR254C 570 nt2.18□□□□□ -2.06
TY1B-JR1P47098 CDC73YLR418C 1182 nt2.18□□□□□ -2.06
TY1B-JR1P47098 VMA9YCL005W-A 222 nt2.18□□□□□ -2.06
TY1B-JR1P47098 PHO81YGR233C 3537 nt2.17□□□□□ -2.06
TY1B-JR1P47098 ORC2YBR060C 1863 nt2.17□□□□□ -2.06
TY1B-JR1P47098 OST1YJL002C 1431 nt2.17□□□□□ -2.06
TY1B-JR1P47098 PCK1YKR097W 1650 nt2.17□□□□□ -2.06
TY1B-JR1P47098 SSN8YNL025C 972 nt2.17□□□□□ -2.06
TY1B-JR1P47098 SYC1YOR179C 567 nt2.17□□□□□ -2.06
TY1B-JR1P47098 SPO75YLL005C 2607 nt2.17□□□□□ -2.06
TY1B-JR1P47098 SMY2YBR172C 2223 nt2.17□□□□□ -2.06
TY1B-JR1P47098 ATG32YIL146C 1590 nt2.16□□□□□ -2.06
TY1B-JR1P47098 FIG4YNL325C 2640 nt2.16□□□□□ -2.06
TY1B-JR1P47098 SCL1YGL011C 759 nt2.16□□□□□ -2.06
TY1B-JR1P47098 YAE1YJR067C 426 nt2.16□□□□□ -2.06
TY1B-JR1P47098 FOL3YMR113W 1284 nt2.16□□□□□ -2.06
TY1B-JR1P47098 MCD1YDL003W 1701 nt2.16□□□□□ -2.06
TY1B-JR1P47098 PKR1YMR123W 369 nt2.15□□□□□ -2.06
TY1B-JR1P47098 YNL035CYNL035C 1170 nt2.15□□□□□ -2.06
TY1B-JR1P47098 YPR089WYPR089W 2667 nt2.15□□□□□ -2.07
TY1B-JR1P47098 ELG1YOR144C 2376 nt2.15□□□□□ -2.07
TY1B-JR1P47098 UBP8YMR223W 1416 nt2.15□□□□□ -2.07
TY1B-JR1P47098 YHR071C-AYHR071C-A 321 nt2.14□□□□□ -2.07
TY1B-JR1P47098 MAC1YMR021C 1254 nt2.14□□□□□ -2.07
TY1B-JR1P47098 TOP2YNL088W 4287 nt2.14□□□□□ -2.07
TY1B-JR1P47098 NEL1YHR035W 1893 nt2.13□□□□□ -2.07
TY1B-JR1P47098 RPS25AYGR027C 327 nt2.13□□□□□ -2.07
TY1B-JR1P47098 TPM2YIL138C 486 nt2.13□□□□□ -2.07
TY1B-JR1P47098 APM1YPL259C 1428 nt2.13□□□□□ -2.07
TY1B-JR1P47098 YKU80YMR106C 1890 nt2.12□□□□□ -2.07
TY1B-JR1P47098 YNL235CYNL235C 432 nt2.12□□□□□ -2.07
TY1B-JR1P47098 YKR047WYKR047W 306 nt2.11□□□□□ -2.07
TY1B-JR1P47098 PIS1YPR113W 663 nt2.11□□□□□ -2.07
TY1B-JR1P47098 RGA2YDR379W 3030 nt2.11□□□□□ -2.07
TY1B-JR1P47098 EPO1YMR124W 2832 nt2.11□□□□□ -2.07
TY1B-JR1P47098 NUP157YER105C 4176 nt2.11□□□□□ -2.07
TY1B-JR1P47098 YER121WYER121W 345 nt2.1□□□□□ -2.07
TY1B-JR1P47098 YKL071WYKL071W 771 nt2.1□□□□□ -2.07
TY1B-JR1P47098 PSY3YLR376C 729 nt2.1□□□□□ -2.07
TY1B-JR1P47098 YMR247W-AYMR247W-A 144 nt2.1□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 27.4 ms