Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HMGCLP35914 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.93■□□□□ 0.94
HMGCLP35914 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.93■□□□□ 0.94
HMGCLP35914 SLC7A5P2-201ENST00000553010 536 ntBASIC20.93■□□□□ 0.94
HMGCLP35914 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HMGCLP35914 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HMGCLP35914 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HMGCLP35914 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLP35914 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLP35914 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCLP35914 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.92■□□□□ 0.94
HMGCLP35914 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.92■□□□□ 0.94
HMGCLP35914 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCLP35914 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HMGCLP35914 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.92■□□□□ 0.94
HMGCLP35914 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.92■□□□□ 0.94
HMGCLP35914 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCLP35914 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCLP35914 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HMGCLP35914 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCLP35914 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCLP35914 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HMGCLP35914 KRT18P11-201ENST00000435214 1283 ntBASIC20.91■□□□□ 0.94
HMGCLP35914 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCLP35914 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCLP35914 AC137761.2-201ENST00000561729 223 ntBASIC20.91■□□□□ 0.94
HMGCLP35914 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCLP35914 AC145350.3-201ENST00000569033 163 ntBASIC20.91■□□□□ 0.94
HMGCLP35914 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.91■□□□□ 0.94
HMGCLP35914 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLP35914 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.9■□□□□ 0.94
HMGCLP35914 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HMGCLP35914 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.9■□□□□ 0.94
HMGCLP35914 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLP35914 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.9■□□□□ 0.94
HMGCLP35914 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.9■□□□□ 0.94
HMGCLP35914 AC022517.1-201ENST00000592429 346 ntBASIC20.9■□□□□ 0.94
HMGCLP35914 UBE2DNL-204ENST00000602536 740 ntBASIC20.9■□□□□ 0.94
HMGCLP35914 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLP35914 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLP35914 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HMGCLP35914 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
HMGCLP35914 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCLP35914 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCLP35914 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HMGCLP35914 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.89■□□□□ 0.94
HMGCLP35914 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCLP35914 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.89■□□□□ 0.93
HMGCLP35914 AC006015.1-201ENST00000429970 570 ntBASIC20.89■□□□□ 0.93
HMGCLP35914 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.89■□□□□ 0.93
HMGCLP35914 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.89■□□□□ 0.93
HMGCLP35914 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCLP35914 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCLP35914 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HMGCLP35914 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HMGCLP35914 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HMGCLP35914 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HMGCLP35914 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGCLP35914 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLP35914 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLP35914 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLP35914 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.88■□□□□ 0.93
HMGCLP35914 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLP35914 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.88■□□□□ 0.93
HMGCLP35914 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.88■□□□□ 0.93
HMGCLP35914 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HMGCLP35914 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGCLP35914 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.88■□□□□ 0.93
HMGCLP35914 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLP35914 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
HMGCLP35914 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLP35914 CLDN5-201ENST00000403084 2357 ntBASIC20.88■□□□□ 0.93
HMGCLP35914 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGCLP35914 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGCLP35914 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGCLP35914 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.87■□□□□ 0.93
HMGCLP35914 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGCLP35914 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGCLP35914 MYCNOS-205ENST00000641950 531 ntBASIC20.87■□□□□ 0.93
HMGCLP35914 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGCLP35914 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms