Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 CHL1YPL008W 2586 nt4.47□□□□□ -1.69
PUF4P25339 UBP12YJL197W 3765 nt4.47□□□□□ -1.69 RIP-Chip
PUF4P25339 GAL80YML051W 1308 nt4.46□□□□□ -1.69
PUF4P25339 API2YDR525W 330 nt4.46□□□□□ -1.7
PUF4P25339 tQ(UUG)CtQ(UUG)C 72 nt4.46□□□□□ -1.7
PUF4P25339 tQ(UUG)D1tQ(UUG)D1 72 nt4.46□□□□□ -1.7
PUF4P25339 tQ(UUG)D2tQ(UUG)D2 72 nt4.46□□□□□ -1.7
PUF4P25339 tQ(UUG)D3tQ(UUG)D3 72 nt4.46□□□□□ -1.7
PUF4P25339 tQ(UUG)E1tQ(UUG)E1 72 nt4.46□□□□□ -1.7
PUF4P25339 tQ(UUG)HtQ(UUG)H 72 nt4.46□□□□□ -1.7
PUF4P25339 tQ(UUG)LtQ(UUG)L 72 nt4.46□□□□□ -1.7
PUF4P25339 YIR020CYIR020C 303 nt4.46□□□□□ -1.7
PUF4P25339 YKL069WYKL069W 543 nt4.46□□□□□ -1.7
PUF4P25339 CTK3YML112W 891 nt4.46□□□□□ -1.7
PUF4P25339 YNL089CYNL089C 477 nt4.46□□□□□ -1.7
PUF4P25339 KIC1YHR102W 3243 nt4.46□□□□□ -1.7
PUF4P25339 15S_rRNA15S_rRNA 1649 nt4.46□□□□□ -1.7
PUF4P25339 FLO8YER109C 2400 nt4.45□□□□□ -1.7
PUF4P25339 YOL019WYOL019W 1656 nt4.45□□□□□ -1.7
PUF4P25339 THI13YDL244W 1023 nt4.45□□□□□ -1.7
PUF4P25339 SDC1YDR469W 528 nt4.45□□□□□ -1.7
PUF4P25339 YGL108CYGL108C 423 nt4.45□□□□□ -1.7
PUF4P25339 YAP3YHL009C 993 nt4.45□□□□□ -1.7
PUF4P25339 YJL127C-BYJL127C-B 159 nt4.45□□□□□ -1.7
PUF4P25339 RAD27YKL113C 1149 nt4.45□□□□□ -1.7 RIP-Chip
PUF4P25339 AIM29YKR074W 468 nt4.45□□□□□ -1.7
PUF4P25339 ICY2YPL250C 411 nt4.45□□□□□ -1.7
PUF4P25339 DAS1YJL149W 1992 nt4.45□□□□□ -1.7
PUF4P25339 NUP133YKR082W 3474 nt4.45□□□□□ -1.7
PUF4P25339 RTC1YOL138C 4026 nt4.44□□□□□ -1.7
PUF4P25339 YER135CYER135C 393 nt4.44□□□□□ -1.7
PUF4P25339 FYV4YHR059W 393 nt4.44□□□□□ -1.7
PUF4P25339 YKL044WYKL044W 321 nt4.44□□□□□ -1.7
PUF4P25339 YKL083WYKL083W 615 nt4.44□□□□□ -1.7 RIP-Chip
PUF4P25339 YLR224WYLR224W 1110 nt4.44□□□□□ -1.7
PUF4P25339 FLD1YLR404W 858 nt4.44□□□□□ -1.7
PUF4P25339 YOR053WYOR053W 342 nt4.44□□□□□ -1.7
PUF4P25339 YOR231C-AYOR231C-A 201 nt4.44□□□□□ -1.7
PUF4P25339 FAA1YOR317W 2103 nt4.44□□□□□ -1.7
PUF4P25339 YBR076C-AYBR076C-A 267 nt4.44□□□□□ -1.7
PUF4P25339 SHG1YBR258C 429 nt4.44□□□□□ -1.7
PUF4P25339 NDC80YIL144W 2076 nt4.44□□□□□ -1.7
PUF4P25339 RPN3YER021W 1572 nt4.44□□□□□ -1.7
PUF4P25339 ADY4YLR227C 1482 nt4.43□□□□□ -1.7
PUF4P25339 TOG1YER184C 2385 nt4.43□□□□□ -1.7
PUF4P25339 YKR078WYKR078W 1758 nt4.43□□□□□ -1.7
PUF4P25339 BCK2YER167W 2556 nt4.43□□□□□ -1.7
PUF4P25339 HNT1YDL125C 477 nt4.43□□□□□ -1.7
PUF4P25339 YDR115WYDR115W 318 nt4.43□□□□□ -1.7
PUF4P25339 SWF1YDR126W 1011 nt4.43□□□□□ -1.7
PUF4P25339 YFL015CYFL015C 495 nt4.43□□□□□ -1.7
PUF4P25339 BIG1YHR101C 1008 nt4.43□□□□□ -1.7
PUF4P25339 ENT3YJR125C 1227 nt4.43□□□□□ -1.7
PUF4P25339 TIF11YMR260C 462 nt4.43□□□□□ -1.7
PUF4P25339 YOR082CYOR082C 342 nt4.43□□□□□ -1.7
PUF4P25339 YPL025CYPL025C 558 nt4.43□□□□□ -1.7
PUF4P25339 YPL038W-AYPL038W-A 192 nt4.43□□□□□ -1.7
PUF4P25339 TPK2YPL203W 1143 nt4.43□□□□□ -1.7
PUF4P25339 MBA1YBR185C 837 nt4.43□□□□□ -1.7
PUF4P25339 YHR214C-CYHR214C-C 1437 nt4.43□□□□□ -1.7
PUF4P25339 MIP6YHR015W 1980 nt4.43□□□□□ -1.7
PUF4P25339 PGS1YCL004W 1566 nt4.43□□□□□ -1.7
PUF4P25339 SSH4YKL124W 1740 nt4.43□□□□□ -1.7
PUF4P25339 YOL075CYOL075C 3885 nt4.43□□□□□ -1.7
PUF4P25339 SIN4YNL236W 2925 nt4.42□□□□□ -1.7
PUF4P25339 STE24YJR117W 1362 nt4.42□□□□□ -1.7 RIP-Chip
PUF4P25339 YIR020C-BYIR020C-B 735 nt4.42□□□□□ -1.7
PUF4P25339 AFB1YLR040C 675 nt4.42□□□□□ -1.7
PUF4P25339 PHO88YBR106W 567 nt4.42□□□□□ -1.7 RIP-Chip
PUF4P25339 YBR285WYBR285W 435 nt4.42□□□□□ -1.7
PUF4P25339 PSP1YDR505C 2526 nt4.42□□□□□ -1.7
PUF4P25339 RIA1YNL163C 3333 nt4.42□□□□□ -1.7
PUF4P25339 PMC1YGL006W 3522 nt4.41□□□□□ -1.7
PUF4P25339 DPH6YLR143W 2058 nt4.41□□□□□ -1.7
PUF4P25339 YGR117CYGR117C 1431 nt4.41□□□□□ -1.7
PUF4P25339 CIT1YNR001C 1440 nt4.41□□□□□ -1.7
PUF4P25339 COP1YDL145C 3606 nt4.41□□□□□ -1.7
PUF4P25339 DAD2YKR083C 402 nt4.41□□□□□ -1.7 RIP-Chip
PUF4P25339 YPT53YNL093W 663 nt4.41□□□□□ -1.7
PUF4P25339 SUI1YNL244C 327 nt4.41□□□□□ -1.7
PUF4P25339 SIL1YOL031C 1266 nt4.41□□□□□ -1.7
PUF4P25339 PHM7YOL084W 2976 nt4.41□□□□□ -1.7
PUF4P25339 YPL278CYPL278C 303 nt4.41□□□□□ -1.7
PUF4P25339 YPR136CYPR136C 513 nt4.41□□□□□ -1.7 RIP-Chip
PUF4P25339 EXO5YBR163W 1758 nt4.4□□□□□ -1.7
PUF4P25339 YCR045W-AYCR045W-A 351 nt4.4□□□□□ -1.71
PUF4P25339 RPP1AYDL081C 321 nt4.4□□□□□ -1.71
PUF4P25339 YGL039WYGL039W 1047 nt4.4□□□□□ -1.71
PUF4P25339 SOL4YGR248W 768 nt4.4□□□□□ -1.71
PUF4P25339 VMA10YHR039C-A 345 nt4.4□□□□□ -1.71
PUF4P25339 RDN5-1RDN5-1 121 nt4.4□□□□□ -1.71
PUF4P25339 IDP2YLR174W 1239 nt4.4□□□□□ -1.71
PUF4P25339 RDN5-6RDN5-6 121 nt4.4□□□□□ -1.71
PUF4P25339 YAF9YNL107W 681 nt4.4□□□□□ -1.71
PUF4P25339 VAM10YOR068C 345 nt4.4□□□□□ -1.71
PUF4P25339 YPL107WYPL107W 747 nt4.4□□□□□ -1.71 RIP-Chip
PUF4P25339 snR54snR54 86 nt4.4□□□□□ -1.71
PUF4P25339 PPN1YDR452W 2025 nt4.39□□□□□ -1.71
PUF4P25339 EBS1YDR206W 2655 nt4.39□□□□□ -1.71
PUF4P25339 SWC4YGR002C 1431 nt4.39□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 40.9 ms