Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
NDUFA1O15239 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.3□□□□□ -0.12
NDUFA1O15239 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFA1O15239 AL356740.2-201ENST00000601559 647 ntBASIC14.3□□□□□ -0.12
NDUFA1O15239 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NDUFA1O15239 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NDUFA1O15239 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFA1O15239 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.3□□□□□ -0.12
NDUFA1O15239 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NDUFA1O15239 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NDUFA1O15239 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA1O15239 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA1O15239 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.29□□□□□ -0.12
NDUFA1O15239 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA1O15239 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NDUFA1O15239 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA1O15239 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA1O15239 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NDUFA1O15239 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.28□□□□□ -0.12
NDUFA1O15239 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NDUFA1O15239 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA1O15239 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA1O15239 AC079089.2-201ENST00000531211 1277 ntBASIC14.28□□□□□ -0.12
NDUFA1O15239 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.28□□□□□ -0.12
NDUFA1O15239 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA1O15239 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA1O15239 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 AC092171.4-201ENST00000609130 632 ntBASIC14.28□□□□□ -0.12
NDUFA1O15239 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA1O15239 AC087239.1-201ENST00000622671 572 ntBASIC14.28□□□□□ -0.12
NDUFA1O15239 AC133637.1-201ENST00000624115 1537 ntBASIC14.28□□□□□ -0.12
NDUFA1O15239 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA1O15239 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA1O15239 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA1O15239 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
NDUFA1O15239 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NDUFA1O15239 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.27□□□□□ -0.12
NDUFA1O15239 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA1O15239 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA1O15239 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
NDUFA1O15239 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.27□□□□□ -0.12
NDUFA1O15239 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NDUFA1O15239 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA1O15239 OR7E47P-201ENST00000546390 1422 ntBASIC14.27□□□□□ -0.12
NDUFA1O15239 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA1O15239 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC14.27□□□□□ -0.13
NDUFA1O15239 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 pRNA.6-201ENST00000610482 90 ntBASIC14.27□□□□□ -0.13
NDUFA1O15239 pRNA.5-201ENST00000612139 90 ntBASIC14.27□□□□□ -0.13
NDUFA1O15239 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 pRNA.11-201ENST00000618423 90 ntBASIC14.27□□□□□ -0.13
NDUFA1O15239 pRNA.13-201ENST00000619112 90 ntBASIC14.27□□□□□ -0.13
NDUFA1O15239 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.27□□□□□ -0.13
NDUFA1O15239 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NDUFA1O15239 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NDUFA1O15239 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA1O15239 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.26□□□□□ -0.13
NDUFA1O15239 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
NDUFA1O15239 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA1O15239 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NDUFA1O15239 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA1O15239 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA1O15239 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms