Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
PCDHA11Q9Y5I1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHA11Q9Y5I1 DUX4L11-201ENST00000611504 1267 ntBASIC29.36■■■□□ 2.29
PCDHA11Q9Y5I1 DUX4L12-201ENST00000614593 1267 ntBASIC29.36■■■□□ 2.29
PCDHA11Q9Y5I1 DUX4L14-201ENST00000621227 1267 ntBASIC29.36■■■□□ 2.29
PCDHA11Q9Y5I1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHA11Q9Y5I1 CR559946.2-201ENST00000623684 991 ntBASIC29.35■■■□□ 2.29
PCDHA11Q9Y5I1 LINC01971-201ENST00000617888 1048 ntBASIC29.34■■■□□ 2.29
PCDHA11Q9Y5I1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA11Q9Y5I1 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA11Q9Y5I1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHA11Q9Y5I1 MIR6090-201ENST00000622481 60 ntBASIC29.32■■■□□ 2.28
PCDHA11Q9Y5I1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.31■■■□□ 2.28
PCDHA11Q9Y5I1 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.31■■■□□ 2.28
PCDHA11Q9Y5I1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDHA11Q9Y5I1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
PCDHA11Q9Y5I1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
PCDHA11Q9Y5I1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.3■■■□□ 2.28
PCDHA11Q9Y5I1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHA11Q9Y5I1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHA11Q9Y5I1 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDHA11Q9Y5I1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.28■■■□□ 2.28
PCDHA11Q9Y5I1 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.28■■■□□ 2.28
PCDHA11Q9Y5I1 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
PCDHA11Q9Y5I1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
PCDHA11Q9Y5I1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHA11Q9Y5I1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHA11Q9Y5I1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHA11Q9Y5I1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHA11Q9Y5I1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.25■■■□□ 2.27
PCDHA11Q9Y5I1 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
PCDHA11Q9Y5I1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.23■■■□□ 2.27
PCDHA11Q9Y5I1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA11Q9Y5I1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA11Q9Y5I1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA11Q9Y5I1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA11Q9Y5I1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA11Q9Y5I1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA11Q9Y5I1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCDHA11Q9Y5I1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PCDHA11Q9Y5I1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.21■■■□□ 2.27
PCDHA11Q9Y5I1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PCDHA11Q9Y5I1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
PCDHA11Q9Y5I1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
PCDHA11Q9Y5I1 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCDHA11Q9Y5I1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.18■■■□□ 2.26
PCDHA11Q9Y5I1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCDHA11Q9Y5I1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHA11Q9Y5I1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHA11Q9Y5I1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA11Q9Y5I1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA11Q9Y5I1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PCDHA11Q9Y5I1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.15■■■□□ 2.26
PCDHA11Q9Y5I1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC29.14■■■□□ 2.26
PCDHA11Q9Y5I1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.14■■■□□ 2.26
PCDHA11Q9Y5I1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHA11Q9Y5I1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
PCDHA11Q9Y5I1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.12■■■□□ 2.25
PCDHA11Q9Y5I1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.11■■■□□ 2.25
PCDHA11Q9Y5I1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.1■■■□□ 2.25
PCDHA11Q9Y5I1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.1■■■□□ 2.25
PCDHA11Q9Y5I1 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
PCDHA11Q9Y5I1 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
PCDHA11Q9Y5I1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
PCDHA11Q9Y5I1 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
PCDHA11Q9Y5I1 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
PCDHA11Q9Y5I1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.06■■■□□ 2.24
PCDHA11Q9Y5I1 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCDHA11Q9Y5I1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCDHA11Q9Y5I1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
PCDHA11Q9Y5I1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHA11Q9Y5I1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.04■■■□□ 2.24
PCDHA11Q9Y5I1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHA11Q9Y5I1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.04■■■□□ 2.24
PCDHA11Q9Y5I1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
PCDHA11Q9Y5I1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
PCDHA11Q9Y5I1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.03■■■□□ 2.24
PCDHA11Q9Y5I1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PCDHA11Q9Y5I1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PCDHA11Q9Y5I1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
PCDHA11Q9Y5I1 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
PCDHA11Q9Y5I1 DUX4L13-201ENST00000554103 1267 ntBASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 DUX4L15-201ENST00000611059 1267 ntBASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 DUX4L23-201ENST00000615195 1269 ntBASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 DUX4L24-201ENST00000617576 1269 ntBASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 DUX4L22-201ENST00000618238 1269 ntBASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 DUX4L20-201ENST00000619712 1269 ntBASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 DUX4L21-201ENST00000622058 1269 ntBASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 DUX4L10-201ENST00000622460 1267 ntBASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 DUX4L25-201ENST00000624915 1269 ntBASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.98■■■□□ 2.23
PCDHA11Q9Y5I1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.97■■■□□ 2.23
PCDHA11Q9Y5I1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.97■■■□□ 2.23
PCDHA11Q9Y5I1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.97■■■□□ 2.23
PCDHA11Q9Y5I1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PCDHA11Q9Y5I1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
PCDHA11Q9Y5I1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PCDHA11Q9Y5I1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.95■■■□□ 2.22
PCDHA11Q9Y5I1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PCDHA11Q9Y5I1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms