Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC33.54■■■□□ 2.96
RPGRQ92834 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC33.54■■■□□ 2.96
RPGRQ92834 MIR4449-201ENST00000578365 66 ntBASIC33.54■■■□□ 2.96
RPGRQ92834 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
RPGRQ92834 MIR639-201ENST00000384974 98 ntBASIC33.52■■■□□ 2.96
RPGRQ92834 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
RPGRQ92834 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC33.51■■■□□ 2.95
RPGRQ92834 RNF166-209ENST00000567844 633 ntTSL 5 BASIC33.5■■■□□ 2.95
RPGRQ92834 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC33.5■■■□□ 2.95
RPGRQ92834 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC33.49■■■□□ 2.95
RPGRQ92834 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC33.49■■■□□ 2.95
RPGRQ92834 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
RPGRQ92834 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC33.48■■■□□ 2.95
RPGRQ92834 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
RPGRQ92834 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
RPGRQ92834 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
RPGRQ92834 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
RPGRQ92834 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC33.46■■■□□ 2.95
RPGRQ92834 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC33.46■■■□□ 2.95
RPGRQ92834 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC33.45■■■□□ 2.95
RPGRQ92834 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
RPGRQ92834 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC33.44■■■□□ 2.94
RPGRQ92834 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC33.44■■■□□ 2.94
RPGRQ92834 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC33.44■■■□□ 2.94
RPGRQ92834 MIR3648-2-201ENST00000581792 180 ntBASIC33.43■■■□□ 2.94
RPGRQ92834 AC016575.1-201ENST00000607026 382 ntBASIC33.43■■■□□ 2.94
RPGRQ92834 MIR3648-1-201ENST00000615959 180 ntBASIC33.43■■■□□ 2.94
RPGRQ92834 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
RPGRQ92834 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC33.42■■■□□ 2.94
RPGRQ92834 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
RPGRQ92834 GDI1-215ENST00000630693 786 ntTSL 4 BASIC33.42■■■□□ 2.94
RPGRQ92834 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
RPGRQ92834 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
RPGRQ92834 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC33.4■■■□□ 2.94
RPGRQ92834 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC33.39■■■□□ 2.94
RPGRQ92834 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC33.39■■■□□ 2.93
RPGRQ92834 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
RPGRQ92834 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC33.37■■■□□ 2.93
RPGRQ92834 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC33.37■■■□□ 2.93
RPGRQ92834 DUX4L11-201ENST00000611504 1267 ntBASIC33.37■■■□□ 2.93
RPGRQ92834 DUX4L12-201ENST00000614593 1267 ntBASIC33.37■■■□□ 2.93
RPGRQ92834 DUX4L14-201ENST00000621227 1267 ntBASIC33.37■■■□□ 2.93
RPGRQ92834 LINC01971-201ENST00000617888 1048 ntBASIC33.36■■■□□ 2.93
RPGRQ92834 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
RPGRQ92834 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC33.34■■■□□ 2.93
RPGRQ92834 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
RPGRQ92834 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC33.33■■■□□ 2.93
RPGRQ92834 CALM3-209ENST00000597743 577 ntTSL 4 BASIC33.33■■■□□ 2.93
RPGRQ92834 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
RPGRQ92834 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
RPGRQ92834 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
RPGRQ92834 AGPS-202ENST00000409888 815 ntTSL 4 BASIC33.31■■■□□ 2.92
RPGRQ92834 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
RPGRQ92834 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC33.3■■■□□ 2.92
RPGRQ92834 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC33.3■■■□□ 2.92
RPGRQ92834 CR559946.2-201ENST00000623684 991 ntBASIC33.3■■■□□ 2.92
RPGRQ92834 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
RPGRQ92834 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
RPGRQ92834 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
RPGRQ92834 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
RPGRQ92834 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.27■■■□□ 2.92
RPGRQ92834 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC33.26■■■□□ 2.92
RPGRQ92834 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC33.26■■■□□ 2.91
RPGRQ92834 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
RPGRQ92834 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
RPGRQ92834 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.24■■■□□ 2.91
RPGRQ92834 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC33.21■■■□□ 2.91
RPGRQ92834 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC33.2■■■□□ 2.91
RPGRQ92834 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
RPGRQ92834 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
RPGRQ92834 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC33.19■■■□□ 2.9
RPGRQ92834 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
RPGRQ92834 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
RPGRQ92834 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
RPGRQ92834 HSD17B1P1-201ENST00000590052 955 ntBASIC33.16■■■□□ 2.9
RPGRQ92834 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
RPGRQ92834 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC33.16■■■□□ 2.9
RPGRQ92834 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RPGRQ92834 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RPGRQ92834 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
RPGRQ92834 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC33.15■■■□□ 2.9
RPGRQ92834 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
RPGRQ92834 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
RPGRQ92834 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
RPGRQ92834 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
RPGRQ92834 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
RPGRQ92834 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
RPGRQ92834 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
RPGRQ92834 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
RPGRQ92834 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
RPGRQ92834 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
RPGRQ92834 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC33.1■■■□□ 2.89
RPGRQ92834 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC33.1■■■□□ 2.89
RPGRQ92834 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
RPGRQ92834 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
RPGRQ92834 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC33.08■■■□□ 2.89
RPGRQ92834 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
RPGRQ92834 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC33.07■■■□□ 2.88
RPGRQ92834 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC33.06■■■□□ 2.88
RPGRQ92834 AC120057.4-201ENST00000624722 1615 ntBASIC33.05■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms