Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD6Q8TD26 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.42■■□□□ 1.66
CHD6Q8TD26 AL033527.3-201ENST00000566366 1196 ntBASIC25.4■■□□□ 1.66
CHD6Q8TD26 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHD6Q8TD26 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
CHD6Q8TD26 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHD6Q8TD26 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHD6Q8TD26 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD6Q8TD26 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD6Q8TD26 GPX1-201ENST00000419349 1106 ntBASIC25.37■■□□□ 1.65
CHD6Q8TD26 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.37■■□□□ 1.65
CHD6Q8TD26 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.36■■□□□ 1.65
CHD6Q8TD26 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.36■■□□□ 1.65
CHD6Q8TD26 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHD6Q8TD26 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHD6Q8TD26 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CHD6Q8TD26 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.34■■□□□ 1.65
CHD6Q8TD26 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CHD6Q8TD26 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CHD6Q8TD26 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHD6Q8TD26 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CHD6Q8TD26 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CHD6Q8TD26 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CHD6Q8TD26 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHD6Q8TD26 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHD6Q8TD26 RARRES2P1-201ENST00000474487 481 ntBASIC25.28■■□□□ 1.64
CHD6Q8TD26 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.28■■□□□ 1.64
CHD6Q8TD26 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CHD6Q8TD26 AC008813.1-201ENST00000536597 885 ntBASIC25.26■■□□□ 1.63
CHD6Q8TD26 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHD6Q8TD26 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD6Q8TD26 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHD6Q8TD26 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
CHD6Q8TD26 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHD6Q8TD26 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.24■■□□□ 1.63
CHD6Q8TD26 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHD6Q8TD26 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.23■■□□□ 1.63
CHD6Q8TD26 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHD6Q8TD26 DUX4L13-201ENST00000554103 1267 ntBASIC25.23■■□□□ 1.63
CHD6Q8TD26 DUX4L15-201ENST00000611059 1267 ntBASIC25.23■■□□□ 1.63
CHD6Q8TD26 DUX4L23-201ENST00000615195 1269 ntBASIC25.23■■□□□ 1.63
CHD6Q8TD26 DUX4L24-201ENST00000617576 1269 ntBASIC25.23■■□□□ 1.63
CHD6Q8TD26 DUX4L22-201ENST00000618238 1269 ntBASIC25.23■■□□□ 1.63
CHD6Q8TD26 DUX4L20-201ENST00000619712 1269 ntBASIC25.23■■□□□ 1.63
CHD6Q8TD26 DUX4L21-201ENST00000622058 1269 ntBASIC25.23■■□□□ 1.63
CHD6Q8TD26 DUX4L10-201ENST00000622460 1267 ntBASIC25.23■■□□□ 1.63
CHD6Q8TD26 DUX4L25-201ENST00000624915 1269 ntBASIC25.23■■□□□ 1.63
CHD6Q8TD26 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHD6Q8TD26 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHD6Q8TD26 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD6Q8TD26 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHD6Q8TD26 AL035685.1-201ENST00000636663 812 ntBASIC25.2■■□□□ 1.62
CHD6Q8TD26 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD6Q8TD26 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.2■■□□□ 1.62
CHD6Q8TD26 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.19■■□□□ 1.62
CHD6Q8TD26 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.18■■□□□ 1.62
CHD6Q8TD26 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD6Q8TD26 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.17■■□□□ 1.62
CHD6Q8TD26 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHD6Q8TD26 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.17■■□□□ 1.62
CHD6Q8TD26 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.15■■□□□ 1.62
CHD6Q8TD26 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CHD6Q8TD26 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.14■■□□□ 1.62
CHD6Q8TD26 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.12■■□□□ 1.61
CHD6Q8TD26 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CHD6Q8TD26 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD6Q8TD26 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHD6Q8TD26 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CHD6Q8TD26 TSPY13P-201ENST00000338964 914 ntBASIC25.11■■□□□ 1.61
CHD6Q8TD26 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC25.11■■□□□ 1.61
CHD6Q8TD26 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD6Q8TD26 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CHD6Q8TD26 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD6Q8TD26 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CHD6Q8TD26 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
CHD6Q8TD26 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD6Q8TD26 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.09■■□□□ 1.61
CHD6Q8TD26 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.09■■□□□ 1.61
CHD6Q8TD26 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.08■■□□□ 1.61
CHD6Q8TD26 AC108673.1-201ENST00000510422 1159 ntBASIC25.08■■□□□ 1.61
CHD6Q8TD26 MIR6090-201ENST00000622481 60 ntBASIC25.07■■□□□ 1.6
CHD6Q8TD26 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD6Q8TD26 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.06■■□□□ 1.6
CHD6Q8TD26 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CHD6Q8TD26 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CHD6Q8TD26 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CHD6Q8TD26 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHD6Q8TD26 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CHD6Q8TD26 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHD6Q8TD26 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms