Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 LINC01971-201ENST00000617888 1048 ntBASIC14.98□□□□□ -0.01
RNF213Q63HN8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.98□□□□□ -0.01
RNF213Q63HN8 NTF6A-201ENST00000591175 560 ntBASIC14.98□□□□□ -0.01
RNF213Q63HN8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC14.98□□□□□ -0.01
RNF213Q63HN8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC14.97□□□□□ -0.01
RNF213Q63HN8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RNF213Q63HN8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC14.97□□□□□ -0.01
RNF213Q63HN8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.97□□□□□ -0.01
RNF213Q63HN8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC14.96□□□□□ -0.01
RNF213Q63HN8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF213Q63HN8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RNF213Q63HN8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RNF213Q63HN8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RNF213Q63HN8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RNF213Q63HN8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RNF213Q63HN8 AL035685.1-201ENST00000636663 812 ntBASIC14.94□□□□□ -0.02
RNF213Q63HN8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RNF213Q63HN8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RNF213Q63HN8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.93□□□□□ -0.02
RNF213Q63HN8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RNF213Q63HN8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RNF213Q63HN8 RARRES2P1-201ENST00000474487 481 ntBASIC14.92□□□□□ -0.02
RNF213Q63HN8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RNF213Q63HN8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF213Q63HN8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF213Q63HN8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF213Q63HN8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC14.91□□□□□ -0.02
RNF213Q63HN8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF213Q63HN8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF213Q63HN8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF213Q63HN8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF213Q63HN8 GFER-205ENST00000569451 517 ntTSL 5 BASIC14.89□□□□□ -0.03
RNF213Q63HN8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF213Q63HN8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF213Q63HN8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF213Q63HN8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF213Q63HN8 GPX1-201ENST00000419349 1106 ntBASIC14.89□□□□□ -0.03
RNF213Q63HN8 MIR6090-201ENST00000622481 60 ntBASIC14.88□□□□□ -0.03
RNF213Q63HN8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF213Q63HN8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF213Q63HN8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF213Q63HN8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC14.86□□□□□ -0.03
RNF213Q63HN8 DUX4L13-201ENST00000554103 1267 ntBASIC14.86□□□□□ -0.03
RNF213Q63HN8 DUX4L15-201ENST00000611059 1267 ntBASIC14.86□□□□□ -0.03
RNF213Q63HN8 DUX4L23-201ENST00000615195 1269 ntBASIC14.86□□□□□ -0.03
RNF213Q63HN8 DUX4L24-201ENST00000617576 1269 ntBASIC14.86□□□□□ -0.03
RNF213Q63HN8 DUX4L22-201ENST00000618238 1269 ntBASIC14.86□□□□□ -0.03
RNF213Q63HN8 DUX4L20-201ENST00000619712 1269 ntBASIC14.86□□□□□ -0.03
RNF213Q63HN8 DUX4L21-201ENST00000622058 1269 ntBASIC14.86□□□□□ -0.03
RNF213Q63HN8 DUX4L10-201ENST00000622460 1267 ntBASIC14.86□□□□□ -0.03
RNF213Q63HN8 DUX4L25-201ENST00000624915 1269 ntBASIC14.86□□□□□ -0.03
RNF213Q63HN8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RNF213Q63HN8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF213Q63HN8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF213Q63HN8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
RNF213Q63HN8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC14.85□□□□□ -0.03
RNF213Q63HN8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RNF213Q63HN8 AL451085.2-201ENST00000605085 799 ntBASIC14.84□□□□□ -0.03
RNF213Q63HN8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RNF213Q63HN8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RNF213Q63HN8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.83□□□□□ -0.03
RNF213Q63HN8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
RNF213Q63HN8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RNF213Q63HN8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RNF213Q63HN8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RNF213Q63HN8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RNF213Q63HN8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF213Q63HN8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC14.82□□□□□ -0.04
RNF213Q63HN8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RNF213Q63HN8 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RNF213Q63HN8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 HES6-205ENST00000409356 528 ntTSL 2 BASIC14.8□□□□□ -0.04
RNF213Q63HN8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RNF213Q63HN8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RNF213Q63HN8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RNF213Q63HN8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.79□□□□□ -0.04
RNF213Q63HN8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RNF213Q63HN8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF213Q63HN8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.78□□□□□ -0.04
RNF213Q63HN8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF213Q63HN8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF213Q63HN8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC14.78□□□□□ -0.04
RNF213Q63HN8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF213Q63HN8 TSPY13P-201ENST00000338964 914 ntBASIC14.77□□□□□ -0.05
RNF213Q63HN8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF213Q63HN8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF213Q63HN8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF213Q63HN8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC14.76□□□□□ -0.05
RNF213Q63HN8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
RNF213Q63HN8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF213Q63HN8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RNF213Q63HN8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms