Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 LSB6YJL100W 1824 nt9.05□□□□□ -0.96
TDP1P38319 UGP1YKL035W 1500 nt9.05□□□□□ -0.96
TDP1P38319 YMR103CYMR103C 363 nt9.04□□□□□ -0.96
TDP1P38319 FMS1YMR020W 1527 nt9.04□□□□□ -0.96
TDP1P38319 YMR244WYMR244W 1068 nt9.03□□□□□ -0.96
TDP1P38319 ACO2YJL200C 2370 nt9.02□□□□□ -0.97
TDP1P38319 MEP3YPR138C 1470 nt9.01□□□□□ -0.97
TDP1P38319 SGA1YIL099W 1650 nt9□□□□□ -0.97
TDP1P38319 URA8YJR103W 1737 nt9□□□□□ -0.97
TDP1P38319 ZAP1YJL056C 2643 nt9□□□□□ -0.97
TDP1P38319 HIS2YFR025C 1008 nt9□□□□□ -0.97
TDP1P38319 SPP2YOR148C 558 nt9□□□□□ -0.97
TDP1P38319 FLR1YBR008C 1647 nt9□□□□□ -0.97
TDP1P38319 KES1YPL145C 1305 nt9□□□□□ -0.97
TDP1P38319 RSC8YFR037C 1674 nt8.98□□□□□ -0.97
TDP1P38319 GLR1YPL091W 1452 nt8.98□□□□□ -0.97
TDP1P38319 YPS3YLR121C 1527 nt8.98□□□□□ -0.97
TDP1P38319 BET2YPR176C 978 nt8.96□□□□□ -0.98
TDP1P38319 RBG1YAL036C 1110 nt8.95□□□□□ -0.98
TDP1P38319 YLR279WYLR279W 390 nt8.95□□□□□ -0.98
TDP1P38319 OXA1YER154W 1209 nt8.94□□□□□ -0.98
TDP1P38319 YMR209CYMR209C 1374 nt8.94□□□□□ -0.98
TDP1P38319 DLD2YDL178W 1593 nt8.94□□□□□ -0.98
TDP1P38319 ESBP6YNL125C 2022 nt8.93□□□□□ -0.98
TDP1P38319 TSC10YBR265W 963 nt8.93□□□□□ -0.98
TDP1P38319 SEC61YLR378C 1443 nt8.92□□□□□ -0.98
TDP1P38319 SAM2YDR502C 1155 nt8.92□□□□□ -0.98
TDP1P38319 VPS62YGR141W 1404 nt8.91□□□□□ -0.98
TDP1P38319 GTB1YDR221W 2109 nt8.91□□□□□ -0.98
TDP1P38319 MSB4YOL112W 1479 nt8.9□□□□□ -0.98
TDP1P38319 HEM13YDR044W 987 nt8.9□□□□□ -0.98
TDP1P38319 YDL086WYDL086W 822 nt8.89□□□□□ -0.99
TDP1P38319 QDR2YIL121W 1629 nt8.89□□□□□ -0.99
TDP1P38319 FCY21YER060W 1587 nt8.87□□□□□ -0.99
TDP1P38319 ILV2YMR108W 2064 nt8.87□□□□□ -0.99
TDP1P38319 MSC1YML128C 1542 nt8.85□□□□□ -0.99
TDP1P38319 BNI5YNL166C 1347 nt8.85□□□□□ -0.99
TDP1P38319 APT2YDR441C 546 nt8.85□□□□□ -0.99
TDP1P38319 YGR012WYGR012W 1182 nt8.85□□□□□ -0.99
TDP1P38319 RBG2YGR173W 1107 nt8.85□□□□□ -0.99
TDP1P38319 PHO23YNL097C 993 nt8.85□□□□□ -0.99
TDP1P38319 DIG1YPL049C 1359 nt8.85□□□□□ -0.99
TDP1P38319 FUB1YCR076C 753 nt8.83□□□□□ -1
TDP1P38319 YER188WYER188W 720 nt8.83□□□□□ -1
TDP1P38319 GID8YMR135C 1368 nt8.83□□□□□ -1
TDP1P38319 MRS6YOR370C 1812 nt8.8□□□□□ -1
TDP1P38319 RFC1YOR217W 2586 nt8.79□□□□□ -1
TDP1P38319 SSL2YIL143C 2532 nt8.79□□□□□ -1
TDP1P38319 CSM1YCR086W 573 nt8.79□□□□□ -1
TDP1P38319 ODC1YPL134C 933 nt8.79□□□□□ -1
TDP1P38319 SDH5YOL071W 489 nt8.78□□□□□ -1
TDP1P38319 YHR219WYHR219W 1875 nt8.77□□□□□ -1.01
TDP1P38319 TAT2YOL020W 1779 nt8.77□□□□□ -1.01
TDP1P38319 THI72YOR192C 1800 nt8.77□□□□□ -1.01
TDP1P38319 DMA2YNL116W 1569 nt8.77□□□□□ -1.01
TDP1P38319 DTR1YBR180W 1719 nt8.76□□□□□ -1.01
TDP1P38319 PSD1YNL169C 1503 nt8.75□□□□□ -1.01
TDP1P38319 YKL133CYKL133C 1392 nt8.75□□□□□ -1.01
TDP1P38319 OSH7YHR001W 1314 nt8.75□□□□□ -1.01
TDP1P38319 CAB5YDR196C 726 nt8.73□□□□□ -1.01
TDP1P38319 PRY1YJL079C 900 nt8.73□□□□□ -1.01
TDP1P38319 BSP1YPR171W 1731 nt8.73□□□□□ -1.01
TDP1P38319 RAD23YEL037C 1197 nt8.72□□□□□ -1.01
TDP1P38319 AIM1YAL046C 357 nt8.72□□□□□ -1.01
TDP1P38319 GAL2YLR081W 1725 nt8.71□□□□□ -1.01
TDP1P38319 SAM3YPL274W 1764 nt8.71□□□□□ -1.01
TDP1P38319 YHR218WYHR218W 1812 nt8.71□□□□□ -1.01
TDP1P38319 YMR226CYMR226C 804 nt8.71□□□□□ -1.02
TDP1P38319 YPL222C-AYPL222C-A 246 nt8.71□□□□□ -1.02
TDP1P38319 YHL008CYHL008C 1884 nt8.7□□□□□ -1.02
TDP1P38319 DLD3YEL071W 1491 nt8.7□□□□□ -1.02
TDP1P38319 SOL2YCR073W-A 948 nt8.69□□□□□ -1.02
TDP1P38319 CWP2YKL096W-A 279 nt8.69□□□□□ -1.02
TDP1P38319 RAS2YNL098C 969 nt8.69□□□□□ -1.02
TDP1P38319 YDR510C-AYDR510C-A 117 nt8.68□□□□□ -1.02
TDP1P38319 NUC1YJL208C 990 nt8.68□□□□□ -1.02
TDP1P38319 SMM1YNR015W 1155 nt8.68□□□□□ -1.02
TDP1P38319 TOK1YJL093C 2076 nt8.68□□□□□ -1.02
TDP1P38319 YDR455CYDR455C 309 nt8.67□□□□□ -1.02
TDP1P38319 CYT1YOR065W 930 nt8.67□□□□□ -1.02
TDP1P38319 GPN2YOR262W 1044 nt8.67□□□□□ -1.02
TDP1P38319 RIB3YDR487C 627 nt8.66□□□□□ -1.02
TDP1P38319 MDM35YKL053C-A 261 nt8.66□□□□□ -1.02
TDP1P38319 YLR111WYLR111W 333 nt8.66□□□□□ -1.02
TDP1P38319 GND1YHR183W 1470 nt8.65□□□□□ -1.02
TDP1P38319 ENT4YLL038C 744 nt8.65□□□□□ -1.02
TDP1P38319 YLR046CYLR046C 813 nt8.65□□□□□ -1.02
TDP1P38319 LSR1LSR1 1175 nt8.65□□□□□ -1.02
TDP1P38319 EAF3YPR023C 1206 nt8.65□□□□□ -1.02
TDP1P38319 ASP3-1YLR155C 1089 nt8.64□□□□□ -1.03
TDP1P38319 ASP3-2YLR157C 1089 nt8.64□□□□□ -1.03
TDP1P38319 ASP3-3YLR158C 1089 nt8.64□□□□□ -1.03
TDP1P38319 ASP3-4YLR160C 1089 nt8.64□□□□□ -1.03
TDP1P38319 LSB5YCL034W 1065 nt8.64□□□□□ -1.03
TDP1P38319 ITR2YOL103W 1830 nt8.63□□□□□ -1.03
TDP1P38319 RPT5YOR117W 1305 nt8.62□□□□□ -1.03
TDP1P38319 OYE2YHR179W 1203 nt8.61□□□□□ -1.03
TDP1P38319 HXK1YFR053C 1458 nt8.61□□□□□ -1.03
TDP1P38319 HXT10YFL011W 1641 nt8.61□□□□□ -1.03
TDP1P38319 RPD3YNL330C 1302 nt8.6□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 63.4 ms