Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 MSB4YOL112W 1479 nt10.29□□□□□ -0.76
MSH3P25336 YHL008CYHL008C 1884 nt10.28□□□□□ -0.76
MSH3P25336 ILV3YJR016C 1758 nt10.28□□□□□ -0.76
MSH3P25336 YMR209CYMR209C 1374 nt10.27□□□□□ -0.76
MSH3P25336 YGR012WYGR012W 1182 nt10.27□□□□□ -0.77
MSH3P25336 YMR103CYMR103C 363 nt10.27□□□□□ -0.77
MSH3P25336 PET8YNL003C 855 nt10.27□□□□□ -0.77
MSH3P25336 MEP3YPR138C 1470 nt10.26□□□□□ -0.77
MSH3P25336 YOR325WYOR325W 474 nt10.26□□□□□ -0.77
MSH3P25336 SDH5YOL071W 489 nt10.25□□□□□ -0.77
MSH3P25336 ARO7YPR060C 771 nt10.25□□□□□ -0.77
MSH3P25336 RFC1YOR217W 2586 nt10.24□□□□□ -0.77
MSH3P25336 ILV2YMR108W 2064 nt10.24□□□□□ -0.77
MSH3P25336 YIL100C-AYIL100C-A 339 nt10.23□□□□□ -0.77
MSH3P25336 THI72YOR192C 1800 nt10.22□□□□□ -0.77
MSH3P25336 CWC15YDR163W 528 nt10.22□□□□□ -0.77
MSH3P25336 FCY21YER060W 1587 nt10.21□□□□□ -0.78
MSH3P25336 FMS1YMR020W 1527 nt10.2□□□□□ -0.78
MSH3P25336 RAD23YEL037C 1197 nt10.19□□□□□ -0.78
MSH3P25336 ACH1YBL015W 1581 nt10.18□□□□□ -0.78
MSH3P25336 APT2YDR441C 546 nt10.18□□□□□ -0.78
MSH3P25336 YNL024CYNL024C 741 nt10.18□□□□□ -0.78
MSH3P25336 FLR1YBR008C 1647 nt10.18□□□□□ -0.78
MSH3P25336 OXA1YER154W 1209 nt10.17□□□□□ -0.78
MSH3P25336 OPI10YOL032W 741 nt10.17□□□□□ -0.78
MSH3P25336 GLR1YPL091W 1452 nt10.17□□□□□ -0.78
MSH3P25336 SEC61YLR378C 1443 nt10.16□□□□□ -0.78
MSH3P25336 CAB5YDR196C 726 nt10.15□□□□□ -0.78
MSH3P25336 YPS3YLR121C 1527 nt10.15□□□□□ -0.78
MSH3P25336 SPP2YOR148C 558 nt10.14□□□□□ -0.79
MSH3P25336 YPL222C-AYPL222C-A 246 nt10.14□□□□□ -0.79
MSH3P25336 RSC8YFR037C 1674 nt10.14□□□□□ -0.79
MSH3P25336 DLD2YDL178W 1593 nt10.14□□□□□ -0.79
MSH3P25336 CCT2YIL142W 1584 nt10.14□□□□□ -0.79
MSH3P25336 SAM2YDR502C 1155 nt10.13□□□□□ -0.79
MSH3P25336 RIB3YDR487C 627 nt10.11□□□□□ -0.79
MSH3P25336 PHO23YNL097C 993 nt10.11□□□□□ -0.79
MSH3P25336 HXK1YFR053C 1458 nt10.1□□□□□ -0.79
MSH3P25336 LSB6YJL100W 1824 nt10.1□□□□□ -0.79
MSH3P25336 BNI5YNL166C 1347 nt10.09□□□□□ -0.79
MSH3P25336 MSC1YML128C 1542 nt10.09□□□□□ -0.79
MSH3P25336 ARO8YGL202W 1503 nt10.08□□□□□ -0.8
MSH3P25336 DTR1YBR180W 1719 nt10.08□□□□□ -0.8
MSH3P25336 YMR244WYMR244W 1068 nt10.08□□□□□ -0.8
MSH3P25336 TOK1YJL093C 2076 nt10.08□□□□□ -0.8
MSH3P25336 GAL2YLR081W 1725 nt10.07□□□□□ -0.8
MSH3P25336 YLR111WYLR111W 333 nt10.07□□□□□ -0.8
MSH3P25336 YLR437C-AYLR437C-A 228 nt10.07□□□□□ -0.8
MSH3P25336 COQ8YGL119W 1506 nt10.07□□□□□ -0.8
MSH3P25336 ALD5YER073W 1563 nt10.06□□□□□ -0.8
MSH3P25336 CSM1YCR086W 573 nt10.06□□□□□ -0.8
MSH3P25336 HEM13YDR044W 987 nt10.06□□□□□ -0.8
MSH3P25336 FUB1YCR076C 753 nt10.05□□□□□ -0.8
MSH3P25336 SMM1YNR015W 1155 nt10.05□□□□□ -0.8
MSH3P25336 VPS62YGR141W 1404 nt10.05□□□□□ -0.8
MSH3P25336 GND1YHR183W 1470 nt10.04□□□□□ -0.8
MSH3P25336 YER188WYER188W 720 nt10.04□□□□□ -0.8
MSH3P25336 PRY1YJL079C 900 nt10.04□□□□□ -0.8
MSH3P25336 UGP1YKL035W 1500 nt10.03□□□□□ -0.8
MSH3P25336 YMR226CYMR226C 804 nt10.03□□□□□ -0.8
MSH3P25336 PSD1YNL169C 1503 nt10.02□□□□□ -0.8
MSH3P25336 YDL086WYDL086W 822 nt10.02□□□□□ -0.81
MSH3P25336 KES1YPL145C 1305 nt10□□□□□ -0.81
MSH3P25336 SGA1YIL099W 1650 nt9.99□□□□□ -0.81
MSH3P25336 ZAP1YJL056C 2643 nt9.98□□□□□ -0.81
MSH3P25336 BET2YPR176C 978 nt9.98□□□□□ -0.81
MSH3P25336 LOT5YKL183W 921 nt9.97□□□□□ -0.81
MSH3P25336 MTO1YGL236C 2010 nt9.97□□□□□ -0.81
MSH3P25336 SAM3YPL274W 1764 nt9.96□□□□□ -0.81
MSH3P25336 HIS2YFR025C 1008 nt9.96□□□□□ -0.82
MSH3P25336 OSH7YHR001W 1314 nt9.94□□□□□ -0.82
MSH3P25336 RBG2YGR173W 1107 nt9.94□□□□□ -0.82
MSH3P25336 NUC1YJL208C 990 nt9.94□□□□□ -0.82
MSH3P25336 YJR154WYJR154W 1041 nt9.94□□□□□ -0.82
MSH3P25336 QDR2YIL121W 1629 nt9.93□□□□□ -0.82
MSH3P25336 RAS2YNL098C 969 nt9.92□□□□□ -0.82
MSH3P25336 LSB5YCL034W 1065 nt9.92□□□□□ -0.82
MSH3P25336 TAT2YOL020W 1779 nt9.92□□□□□ -0.82
MSH3P25336 HXT12YIL170W 1374 nt9.91□□□□□ -0.82
MSH3P25336 BSP1YPR171W 1731 nt9.91□□□□□ -0.82
MSH3P25336 Q0010Q0010 387 nt9.91□□□□□ -0.82
MSH3P25336 DIG1YPL049C 1359 nt9.9□□□□□ -0.82
MSH3P25336 RPT5YOR117W 1305 nt9.9□□□□□ -0.82
MSH3P25336 YEL009C-AYEL009C-A 408 nt9.9□□□□□ -0.82
MSH3P25336 SOL2YCR073W-A 948 nt9.88□□□□□ -0.83
MSH3P25336 LSB3YFR024C-A 1380 nt9.88□□□□□ -0.83
MSH3P25336 YJL118WYJL118W 660 nt9.87□□□□□ -0.83
MSH3P25336 EAF3YPR023C 1206 nt9.87□□□□□ -0.83
MSH3P25336 YJL055WYJL055W 738 nt9.86□□□□□ -0.83
MSH3P25336 VRG4YGL225W 1014 nt9.85□□□□□ -0.83
MSH3P25336 OYE2YHR179W 1203 nt9.85□□□□□ -0.83
MSH3P25336 GPN2YOR262W 1044 nt9.85□□□□□ -0.83
MSH3P25336 GID8YMR135C 1368 nt9.85□□□□□ -0.83
MSH3P25336 CYT1YOR065W 930 nt9.84□□□□□ -0.83
MSH3P25336 REG2YBR050C 1017 nt9.84□□□□□ -0.83
MSH3P25336 YDR455CYDR455C 309 nt9.83□□□□□ -0.84
MSH3P25336 AIM1YAL046C 357 nt9.83□□□□□ -0.84
MSH3P25336 YPI1YFR003C 468 nt9.82□□□□□ -0.84
MSH3P25336 TPS1YBR126C 1488 nt9.82□□□□□ -0.84
MSH3P25336 DMA2YNL116W 1569 nt9.81□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 59.3 ms