Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TNRC18O15417 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.63■■■□□ 2.49
TNRC18O15417 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.63■■■□□ 2.49
TNRC18O15417 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.63■■■□□ 2.49
TNRC18O15417 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.62■■■□□ 2.49
TNRC18O15417 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TNRC18O15417 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TNRC18O15417 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
TNRC18O15417 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
TNRC18O15417 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.59■■■□□ 2.49
TNRC18O15417 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TNRC18O15417 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.57■■■□□ 2.48
TNRC18O15417 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
TNRC18O15417 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
TNRC18O15417 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TNRC18O15417 GPX1-201ENST00000419349 1106 ntBASIC30.55■■■□□ 2.48
TNRC18O15417 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.55■■■□□ 2.48
TNRC18O15417 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
TNRC18O15417 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
TNRC18O15417 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
TNRC18O15417 AL033527.3-201ENST00000566366 1196 ntBASIC30.52■■■□□ 2.48
TNRC18O15417 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.51■■■□□ 2.47
TNRC18O15417 AC008813.1-201ENST00000536597 885 ntBASIC30.49■■■□□ 2.47
TNRC18O15417 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TNRC18O15417 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
TNRC18O15417 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TNRC18O15417 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TNRC18O15417 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC30.46■■■□□ 2.47
TNRC18O15417 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.45■■■□□ 2.46
TNRC18O15417 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
TNRC18O15417 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
TNRC18O15417 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
TNRC18O15417 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.42■■■□□ 2.46
TNRC18O15417 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.41■■■□□ 2.46
TNRC18O15417 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TNRC18O15417 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TNRC18O15417 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.39■■■□□ 2.45
TNRC18O15417 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
TNRC18O15417 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.37■■■□□ 2.45
TNRC18O15417 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TNRC18O15417 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TNRC18O15417 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.36■■■□□ 2.45
TNRC18O15417 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
TNRC18O15417 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
TNRC18O15417 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.35■■■□□ 2.45
TNRC18O15417 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.34■■■□□ 2.45
TNRC18O15417 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 MIR6090-201ENST00000622481 60 ntBASIC30.33■■■□□ 2.45
TNRC18O15417 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TNRC18O15417 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
TNRC18O15417 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.33■■■□□ 2.45
TNRC18O15417 MIR935-201ENST00000401179 91 ntBASIC30.32■■■□□ 2.44
TNRC18O15417 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.31■■■□□ 2.44
TNRC18O15417 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TNRC18O15417 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.28■■■□□ 2.44
TNRC18O15417 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TNRC18O15417 DUX4L13-201ENST00000554103 1267 ntBASIC30.28■■■□□ 2.44
TNRC18O15417 DUX4L15-201ENST00000611059 1267 ntBASIC30.28■■■□□ 2.44
TNRC18O15417 DUX4L23-201ENST00000615195 1269 ntBASIC30.28■■■□□ 2.44
TNRC18O15417 DUX4L24-201ENST00000617576 1269 ntBASIC30.28■■■□□ 2.44
TNRC18O15417 DUX4L22-201ENST00000618238 1269 ntBASIC30.28■■■□□ 2.44
TNRC18O15417 DUX4L20-201ENST00000619712 1269 ntBASIC30.28■■■□□ 2.44
TNRC18O15417 DUX4L21-201ENST00000622058 1269 ntBASIC30.28■■■□□ 2.44
TNRC18O15417 DUX4L10-201ENST00000622460 1267 ntBASIC30.28■■■□□ 2.44
TNRC18O15417 DUX4L25-201ENST00000624915 1269 ntBASIC30.28■■■□□ 2.44
TNRC18O15417 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.25■■■□□ 2.43
TNRC18O15417 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TNRC18O15417 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC30.24■■■□□ 2.43
TNRC18O15417 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
TNRC18O15417 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
TNRC18O15417 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
TNRC18O15417 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
TNRC18O15417 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.23■■■□□ 2.43
TNRC18O15417 RARRES2P1-201ENST00000474487 481 ntBASIC30.23■■■□□ 2.43
TNRC18O15417 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
TNRC18O15417 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
TNRC18O15417 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
TNRC18O15417 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TNRC18O15417 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.22■■■□□ 2.43
TNRC18O15417 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.21■■■□□ 2.43
TNRC18O15417 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
TNRC18O15417 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
TNRC18O15417 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC30.2■■■□□ 2.43
TNRC18O15417 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
TNRC18O15417 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
TNRC18O15417 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
TNRC18O15417 AC108673.1-201ENST00000510422 1159 ntBASIC30.2■■■□□ 2.42
TNRC18O15417 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TNRC18O15417 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
TNRC18O15417 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.19■■■□□ 2.42
TNRC18O15417 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.18■■■□□ 2.42
TNRC18O15417 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms