Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 AC091799.1-201ENST00000422823 811 ntBASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 AL158047.1-201ENST00000445918 881 ntBASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHAC2Q9Y5I4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDHAC2Q9Y5I4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 C1orf229-201ENST00000623686 2258 ntBASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 AC010542.4-201ENST00000563151 1910 ntBASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.17■■□□□ 1.62
PCDHAC2Q9Y5I4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 C11orf96-202ENST00000528572 1834 ntBASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 UNC93B5-201ENST00000530315 699 ntBASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 AC092053.2-201ENST00000640557 1818 ntBASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.16■■□□□ 1.62
PCDHAC2Q9Y5I4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 AL596275.1-201ENST00000423464 877 ntBASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHAC2Q9Y5I4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 AC142381.4-202ENST00000563973 229 ntBASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC25.14■■□□□ 1.62
PCDHAC2Q9Y5I4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHAC2Q9Y5I4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
PCDHAC2Q9Y5I4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHAC2Q9Y5I4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.14■■□□□ 1.61
PCDHAC2Q9Y5I4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 LSM12P1-201ENST00000411836 588 ntBASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 SERPINH1P1-201ENST00000419794 1249 ntBASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 AC073648.6-201ENST00000641589 218 ntBASIC25.13■■□□□ 1.61
PCDHAC2Q9Y5I4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms