Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 LINC01006-201ENST00000333319 2292 ntBASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
COMMD4Q9H0A8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 FEM1AP1-201ENST00000431297 1995 ntBASIC18.5■□□□□ 0.55
COMMD4Q9H0A8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 AP005435.1-201ENST00000529293 1178 ntBASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 AL138724.1-201ENST00000606771 1088 ntBASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 AC138932.1-201ENST00000534164 6830 ntBASIC18.49■□□□□ 0.55
COMMD4Q9H0A8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD4Q9H0A8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COMMD4Q9H0A8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD4Q9H0A8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.48■□□□□ 0.55
COMMD4Q9H0A8 DUX4L19-201ENST00000557448 1267 ntBASIC18.48■□□□□ 0.55
COMMD4Q9H0A8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD4Q9H0A8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD4Q9H0A8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
COMMD4Q9H0A8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD4Q9H0A8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 SYT6-210ENST00000641643 1587 ntBASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 AIRN-201ENST00000601203 4374 ntBASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 AP006587.3-201ENST00000525742 1516 ntBASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD4Q9H0A8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD4Q9H0A8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD4Q9H0A8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD4Q9H0A8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD4Q9H0A8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD4Q9H0A8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD4Q9H0A8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD4Q9H0A8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms