Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CSPG4P5Q96PW8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.7■■□□□ 1.06
CSPG4P5Q96PW8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 AL049796.1-201ENST00000565336 1766 ntBASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 AC061975.6-201ENST00000579045 1553 ntBASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CSPG4P5Q96PW8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CSPG4P5Q96PW8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 AC138907.5-202ENST00000569484 235 ntBASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSPG4P5Q96PW8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 AC104187.1-201ENST00000607510 612 ntBASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.66■■□□□ 1.06
CSPG4P5Q96PW8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 DUX4L2-201ENST00000561772 1275 ntBASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 DUX4L6-201ENST00000626483 1275 ntBASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 DUX4L1-201ENST00000627662 1275 ntBASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 DUX4L8-201ENST00000629013 1275 ntBASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 DUX4L3-201ENST00000630187 1275 ntBASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 DUX4L7-201ENST00000630678 1275 ntBASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 DUX4L5-201ENST00000630834 1275 ntBASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CSPG4P5Q96PW8 AC004854.2-201ENST00000608450 1441 ntBASIC21.64■■□□□ 1.06
CSPG4P5Q96PW8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CSPG4P5Q96PW8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 AC097381.1-201ENST00000429019 1296 ntBASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 AP004607.4-201ENST00000530158 1459 ntBASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG4P5Q96PW8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG4P5Q96PW8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.63■■□□□ 1.05
CSPG4P5Q96PW8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG4P5Q96PW8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms