Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PABPC1P11940 KRT16P2-201ENST00000414673 1423 ntBASIC21.54■■□□□ 1.04
PABPC1P11940 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PABPC1P11940 AC061975.6-201ENST00000579045 1553 ntBASIC21.53■■□□□ 1.04
PABPC1P11940 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PABPC1P11940 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PABPC1P11940 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.53■■□□□ 1.04
PABPC1P11940 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.53■■□□□ 1.04
PABPC1P11940 AL121832.2-201ENST00000610979 668 ntBASIC21.53■■□□□ 1.04
PABPC1P11940 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PABPC1P11940 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PABPC1P11940 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PABPC1P11940 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PABPC1P11940 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.53■■□□□ 1.04
PABPC1P11940 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
PABPC1P11940 GUSBP5-202ENST00000510805 1989 ntBASIC21.52■■□□□ 1.04
PABPC1P11940 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.52■■□□□ 1.04
PABPC1P11940 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PABPC1P11940 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.52■■□□□ 1.04
PABPC1P11940 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.52■■□□□ 1.04
PABPC1P11940 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PABPC1P11940 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PABPC1P11940 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PABPC1P11940 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PABPC1P11940 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.51■■□□□ 1.03
PABPC1P11940 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PABPC1P11940 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PABPC1P11940 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.51■■□□□ 1.03
PABPC1P11940 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.51■■□□□ 1.03
PABPC1P11940 AC083906.2-201ENST00000511578 360 ntBASIC21.51■■□□□ 1.03
PABPC1P11940 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.51■■□□□ 1.03
PABPC1P11940 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PABPC1P11940 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PABPC1P11940 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PABPC1P11940 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.51■■□□□ 1.03
PABPC1P11940 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.5■■□□□ 1.03
PABPC1P11940 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.5■■□□□ 1.03
PABPC1P11940 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.5■■□□□ 1.03
PABPC1P11940 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PABPC1P11940 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PABPC1P11940 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PABPC1P11940 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
PABPC1P11940 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PABPC1P11940 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PABPC1P11940 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PABPC1P11940 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PABPC1P11940 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
PABPC1P11940 AL024507.2-201ENST00000606070 2574 ntBASIC21.49■■□□□ 1.03
PABPC1P11940 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PABPC1P11940 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.49■■□□□ 1.03
PABPC1P11940 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.49■■□□□ 1.03
PABPC1P11940 AL355802.2-201ENST00000402069 882 ntBASIC21.49■■□□□ 1.03
PABPC1P11940 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
PABPC1P11940 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.49■■□□□ 1.03
PABPC1P11940 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.49■■□□□ 1.03
PABPC1P11940 AC007322.4-201ENST00000509611 723 ntBASIC21.49■■□□□ 1.03
PABPC1P11940 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.49■■□□□ 1.03
PABPC1P11940 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.49■■□□□ 1.03
PABPC1P11940 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PABPC1P11940 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.49■■□□□ 1.03
PABPC1P11940 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.49■■□□□ 1.03
PABPC1P11940 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PABPC1P11940 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.49■■□□□ 1.03
PABPC1P11940 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PABPC1P11940 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PABPC1P11940 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PABPC1P11940 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PABPC1P11940 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PABPC1P11940 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PABPC1P11940 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.48■■□□□ 1.03
PABPC1P11940 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.48■■□□□ 1.03
PABPC1P11940 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.48■■□□□ 1.03
PABPC1P11940 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.48■■□□□ 1.03
PABPC1P11940 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PABPC1P11940 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PABPC1P11940 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PABPC1P11940 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PABPC1P11940 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.48■■□□□ 1.03
PABPC1P11940 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PABPC1P11940 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.47■■□□□ 1.03
PABPC1P11940 AC068338.2-201ENST00000563278 1430 ntBASIC21.47■■□□□ 1.03
PABPC1P11940 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PABPC1P11940 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PABPC1P11940 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PABPC1P11940 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PABPC1P11940 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.47■■□□□ 1.03
PABPC1P11940 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PABPC1P11940 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
PABPC1P11940 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.47■■□□□ 1.03
PABPC1P11940 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms