Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
SFTPBP07988 AP005435.1-201ENST00000529293 1178 ntBASIC18.18■□□□□ 0.5
SFTPBP07988 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.18■□□□□ 0.5
SFTPBP07988 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SFTPBP07988 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SFTPBP07988 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SFTPBP07988 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SFTPBP07988 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SFTPBP07988 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
SFTPBP07988 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SFTPBP07988 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SFTPBP07988 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.17■□□□□ 0.5
SFTPBP07988 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.17■□□□□ 0.5
SFTPBP07988 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SFTPBP07988 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.17■□□□□ 0.5
SFTPBP07988 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.17■□□□□ 0.5
SFTPBP07988 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SFTPBP07988 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.17■□□□□ 0.5
SFTPBP07988 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SFTPBP07988 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.17■□□□□ 0.5
SFTPBP07988 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SFTPBP07988 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SFTPBP07988 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFTPBP07988 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SFTPBP07988 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.16■□□□□ 0.5
SFTPBP07988 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFTPBP07988 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFTPBP07988 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.16■□□□□ 0.5
SFTPBP07988 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SFTPBP07988 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFTPBP07988 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.16■□□□□ 0.5
SFTPBP07988 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SFTPBP07988 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
SFTPBP07988 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.16■□□□□ 0.5
SFTPBP07988 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.15■□□□□ 0.5
SFTPBP07988 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFTPBP07988 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SFTPBP07988 AF106564.1-201ENST00000607058 2553 ntBASIC18.15■□□□□ 0.5
SFTPBP07988 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFTPBP07988 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFTPBP07988 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SFTPBP07988 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SFTPBP07988 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.15■□□□□ 0.5
SFTPBP07988 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.15■□□□□ 0.5
SFTPBP07988 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.15■□□□□ 0.5
SFTPBP07988 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFTPBP07988 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.15■□□□□ 0.5
SFTPBP07988 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.15■□□□□ 0.5
SFTPBP07988 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SFTPBP07988 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.15■□□□□ 0.5
SFTPBP07988 RNF165-205ENST00000588679 2904 ntBASIC18.15■□□□□ 0.5
SFTPBP07988 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.15■□□□□ 0.5
SFTPBP07988 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFTPBP07988 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SFTPBP07988 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SFTPBP07988 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SFTPBP07988 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SFTPBP07988 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SFTPBP07988 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SFTPBP07988 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.14■□□□□ 0.49
SFTPBP07988 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SFTPBP07988 AC104564.3-201ENST00000582367 638 ntBASIC18.14■□□□□ 0.49
SFTPBP07988 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.14■□□□□ 0.49
SFTPBP07988 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SFTPBP07988 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 AP004607.7-201ENST00000527152 1677 ntBASIC18.13■□□□□ 0.49
SFTPBP07988 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.13■□□□□ 0.49
SFTPBP07988 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.13■□□□□ 0.49
SFTPBP07988 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.13■□□□□ 0.49
SFTPBP07988 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SFTPBP07988 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.13■□□□□ 0.49
SFTPBP07988 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.13■□□□□ 0.49
SFTPBP07988 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.13■□□□□ 0.49
SFTPBP07988 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms