Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.61■□□□□ 0.89
ITM2AO43736 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.61■□□□□ 0.89
ITM2AO43736 AL512631.2-201ENST00000604634 923 ntBASIC20.61■□□□□ 0.89
ITM2AO43736 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ITM2AO43736 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
ITM2AO43736 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ITM2AO43736 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.61■□□□□ 0.89
ITM2AO43736 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.61■□□□□ 0.89
ITM2AO43736 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITM2AO43736 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ITM2AO43736 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.61■□□□□ 0.89
ITM2AO43736 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.6■□□□□ 0.89
ITM2AO43736 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.6■□□□□ 0.89
ITM2AO43736 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
ITM2AO43736 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.6■□□□□ 0.89
ITM2AO43736 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.6■□□□□ 0.89
ITM2AO43736 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 SERBP1P1-201ENST00000396021 1160 ntBASIC20.6■□□□□ 0.89
ITM2AO43736 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.6■□□□□ 0.89
ITM2AO43736 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.6■□□□□ 0.89
ITM2AO43736 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
ITM2AO43736 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ITM2AO43736 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ITM2AO43736 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ITM2AO43736 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITM2AO43736 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITM2AO43736 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITM2AO43736 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITM2AO43736 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ITM2AO43736 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ITM2AO43736 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ITM2AO43736 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ITM2AO43736 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITM2AO43736 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.59■□□□□ 0.89
ITM2AO43736 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ITM2AO43736 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.59■□□□□ 0.89
ITM2AO43736 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.58■□□□□ 0.89
ITM2AO43736 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITM2AO43736 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.58■□□□□ 0.89
ITM2AO43736 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITM2AO43736 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITM2AO43736 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITM2AO43736 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITM2AO43736 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITM2AO43736 SLC47A1P1-202ENST00000449666 945 ntBASIC20.58■□□□□ 0.89
ITM2AO43736 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.58■□□□□ 0.89
ITM2AO43736 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
ITM2AO43736 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.58■□□□□ 0.89
ITM2AO43736 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ITM2AO43736 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ITM2AO43736 AC027702.1-201ENST00000563810 1770 ntBASIC20.58■□□□□ 0.89
ITM2AO43736 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITM2AO43736 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITM2AO43736 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
ITM2AO43736 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITM2AO43736 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITM2AO43736 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ITM2AO43736 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ITM2AO43736 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ITM2AO43736 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITM2AO43736 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITM2AO43736 AFG3L1P-217ENST00000557444 2447 ntBASIC20.57■□□□□ 0.88
ITM2AO43736 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ITM2AO43736 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITM2AO43736 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITM2AO43736 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ITM2AO43736 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.57■□□□□ 0.88
ITM2AO43736 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.57■□□□□ 0.88
ITM2AO43736 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.57■□□□□ 0.88
ITM2AO43736 AP005435.1-201ENST00000529293 1178 ntBASIC20.57■□□□□ 0.88
ITM2AO43736 AC092171.4-201ENST00000609130 632 ntBASIC20.57■□□□□ 0.88
ITM2AO43736 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ITM2AO43736 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ITM2AO43736 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ITM2AO43736 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.57■□□□□ 0.88
ITM2AO43736 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.56■□□□□ 0.88
ITM2AO43736 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITM2AO43736 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ITM2AO43736 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.56■□□□□ 0.88
ITM2AO43736 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ITM2AO43736 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.56■□□□□ 0.88
ITM2AO43736 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
ITM2AO43736 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITM2AO43736 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ITM2AO43736 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITM2AO43736 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.56■□□□□ 0.88
ITM2AO43736 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITM2AO43736 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITM2AO43736 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITM2AO43736 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITM2AO43736 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ITM2AO43736 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms