Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA1O15239 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NDUFA1O15239 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.35□□□□□ -0.11
NDUFA1O15239 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFA1O15239 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFA1O15239 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFA1O15239 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NDUFA1O15239 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFA1O15239 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFA1O15239 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NDUFA1O15239 KRT16P3-201ENST00000439127 1283 ntBASIC14.34□□□□□ -0.11
NDUFA1O15239 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.34□□□□□ -0.11
NDUFA1O15239 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 AL451085.2-201ENST00000605085 799 ntBASIC14.34□□□□□ -0.11
NDUFA1O15239 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFA1O15239 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NDUFA1O15239 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
NDUFA1O15239 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
NDUFA1O15239 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA1O15239 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
NDUFA1O15239 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
NDUFA1O15239 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFA1O15239 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFA1O15239 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.33□□□□□ -0.11
NDUFA1O15239 AC026471.6-201ENST00000622954 1905 ntBASIC14.33□□□□□ -0.11
NDUFA1O15239 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NDUFA1O15239 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFA1O15239 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA1O15239 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA1O15239 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA1O15239 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
NDUFA1O15239 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.33□□□□□ -0.12
NDUFA1O15239 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFA1O15239 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA1O15239 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
NDUFA1O15239 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA1O15239 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFA1O15239 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFA1O15239 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA1O15239 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFA1O15239 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NDUFA1O15239 AP005212.1-201ENST00000581547 1997 ntBASIC14.33□□□□□ -0.12
NDUFA1O15239 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NDUFA1O15239 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFA1O15239 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.32□□□□□ -0.12
NDUFA1O15239 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.32□□□□□ -0.12
NDUFA1O15239 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFA1O15239 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFA1O15239 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA1O15239 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
NDUFA1O15239 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NDUFA1O15239 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
NDUFA1O15239 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NDUFA1O15239 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
NDUFA1O15239 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NDUFA1O15239 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFA1O15239 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFA1O15239 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFA1O15239 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFA1O15239 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFA1O15239 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFA1O15239 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NDUFA1O15239 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFA1O15239 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFA1O15239 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFA1O15239 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFA1O15239 UNC93B8-201ENST00000511903 705 ntBASIC14.31□□□□□ -0.12
NDUFA1O15239 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFA1O15239 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFA1O15239 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NDUFA1O15239 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.31□□□□□ -0.12
NDUFA1O15239 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFA1O15239 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NDUFA1O15239 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.31□□□□□ -0.12
NDUFA1O15239 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.3□□□□□ -0.12
NDUFA1O15239 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
NDUFA1O15239 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NDUFA1O15239 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NDUFA1O15239 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms