Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-6A0A0B4J262 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 AC131212.1-201ENST00000613771 668 ntBASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-6A0A0B4J262 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 LINC01529-204ENST00000636474 1715 ntBASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 SRD5A1P1-201ENST00000442297 786 ntBASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 AC092171.4-201ENST00000609130 632 ntBASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 AC241377.3-202ENST00000626088 1088 ntBASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 AC241585.3-202ENST00000628937 1088 ntBASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 AC245100.8-202ENST00000629247 1058 ntBASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-6A0A0B4J262 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 AC010542.4-201ENST00000563151 1910 ntBASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV8-6A0A0B4J262 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
TRAV8-6A0A0B4J262 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms