Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 BNA7YDR428C 786 nt4.89□□□□□ -1.63
MSH4P40965 YER046W-AYER046W-A 330 nt4.89□□□□□ -1.63
MSH4P40965 YER076CYER076C 909 nt4.89□□□□□ -1.63
MSH4P40965 RPS20YHL015W 366 nt4.89□□□□□ -1.63
MSH4P40965 RPL8AYHL033C 771 nt4.89□□□□□ -1.63
MSH4P40965 YHI9YHR029C 885 nt4.89□□□□□ -1.63
MSH4P40965 YET1YKL065C 621 nt4.89□□□□□ -1.63
MSH4P40965 YMR173W-AYMR173W-A 1185 nt4.89□□□□□ -1.63
MSH4P40965 snR17asnR17a 333 nt4.89□□□□□ -1.63
MSH4P40965 YBR062CYBR062C 543 nt4.89□□□□□ -1.63
MSH4P40965 YBR090CYBR090C 369 nt4.89□□□□□ -1.63
MSH4P40965 APD1YBR151W 951 nt4.89□□□□□ -1.63
MSH4P40965 YCT1YLL055W 1596 nt4.89□□□□□ -1.63
MSH4P40965 PEX30YLR324W 1572 nt4.89□□□□□ -1.63
MSH4P40965 DAS1YJL149W 1992 nt4.89□□□□□ -1.63
MSH4P40965 CDC40YDR364C 1368 nt4.89□□□□□ -1.63
MSH4P40965 VHS3YOR054C 2025 nt4.89□□□□□ -1.63
MSH4P40965 DSN1YIR010W 1731 nt4.89□□□□□ -1.63
MSH4P40965 SRP1YNL189W 1629 nt4.88□□□□□ -1.63
MSH4P40965 PBP4YDL053C 558 nt4.88□□□□□ -1.63
MSH4P40965 RPL9AYGL147C 576 nt4.88□□□□□ -1.63
MSH4P40965 BIO2YGR286C 1128 nt4.88□□□□□ -1.63
MSH4P40965 YHR050W-AYHR050W-A 171 nt4.88□□□□□ -1.63
MSH4P40965 YKL083WYKL083W 615 nt4.88□□□□□ -1.63
MSH4P40965 YAL068W-AYAL068W-A 255 nt4.88□□□□□ -1.63
MSH4P40965 BER1YLR412W 825 nt4.88□□□□□ -1.63
MSH4P40965 YML031C-AYML031C-A 336 nt4.88□□□□□ -1.63
MSH4P40965 CAT5YOR125C 702 nt4.88□□□□□ -1.63
MSH4P40965 DDP1YOR163W 567 nt4.88□□□□□ -1.63
MSH4P40965 YPL119C-AYPL119C-A 264 nt4.88□□□□□ -1.63
MSH4P40965 YMR046CYMR046C 1323 nt4.88□□□□□ -1.63
MSH4P40965 SNU56YDR240C 1479 nt4.88□□□□□ -1.63
MSH4P40965 VID28YIL017C 2766 nt4.87□□□□□ -1.63
MSH4P40965 SEC59YMR013C 1560 nt4.87□□□□□ -1.63
MSH4P40965 YDL228CYDL228C 642 nt4.87□□□□□ -1.63
MSH4P40965 RPL27BYDR471W 411 nt4.87□□□□□ -1.63
MSH4P40965 YMR153C-AYMR153C-A 336 nt4.87□□□□□ -1.63
MSH4P40965 YBL055CYBL055C 1257 nt4.87□□□□□ -1.63
MSH4P40965 YBR242WYBR242W 717 nt4.87□□□□□ -1.63
MSH4P40965 ESA1YOR244W 1338 nt4.87□□□□□ -1.63
MSH4P40965 UBP16YPL072W 1500 nt4.87□□□□□ -1.63
MSH4P40965 COP1YDL145C 3606 nt4.86□□□□□ -1.63
MSH4P40965 GEM1YAL048C 1989 nt4.86□□□□□ -1.63
MSH4P40965 YER068C-AYER068C-A 432 nt4.86□□□□□ -1.63
MSH4P40965 PRM8YGL053W 714 nt4.86□□□□□ -1.63
MSH4P40965 EFB1YAL003W 621 nt4.86□□□□□ -1.63
MSH4P40965 YJR038CYJR038C 363 nt4.86□□□□□ -1.63
MSH4P40965 YAR075WYAR075W 474 nt4.86□□□□□ -1.63
MSH4P40965 YNL235CYNL235C 432 nt4.86□□□□□ -1.63
MSH4P40965 ALO1YML086C 1581 nt4.86□□□□□ -1.63
MSH4P40965 MNR2YKL064W 2910 nt4.86□□□□□ -1.63
MSH4P40965 RAD54YGL163C 2697 nt4.85□□□□□ -1.63
MSH4P40965 CWH43YCR017C 2862 nt4.85□□□□□ -1.63
MSH4P40965 ARO80YDR421W 2853 nt4.85□□□□□ -1.63
MSH4P40965 RPP1AYDL081C 321 nt4.85□□□□□ -1.63
MSH4P40965 ATP5YDR298C 639 nt4.85□□□□□ -1.63
MSH4P40965 GET1YGL020C 708 nt4.85□□□□□ -1.63
MSH4P40965 PET54YGR222W 882 nt4.85□□□□□ -1.63
MSH4P40965 UTP11YKL099C 753 nt4.85□□□□□ -1.63
MSH4P40965 CMC2YBL059C-A 330 nt4.85□□□□□ -1.63
MSH4P40965 YNR034W-AYNR034W-A 297 nt4.85□□□□□ -1.63
MSH4P40965 YPL038W-AYPL038W-A 192 nt4.85□□□□□ -1.63
MSH4P40965 KRE2YDR483W 1329 nt4.85□□□□□ -1.63
MSH4P40965 RAD52YML032C 1416 nt4.85□□□□□ -1.63
MSH4P40965 YCR023CYCR023C 1836 nt4.85□□□□□ -1.63
MSH4P40965 RPG1YBR079C 2895 nt4.85□□□□□ -1.63
MSH4P40965 MSS4YDR208W 2340 nt4.84□□□□□ -1.63
MSH4P40965 YPL109CYPL109C 1974 nt4.84□□□□□ -1.63
MSH4P40965 CUE3YGL110C 1875 nt4.84□□□□□ -1.63
MSH4P40965 15S_rRNA15S_rRNA 1649 nt4.84□□□□□ -1.63
MSH4P40965 RNT1YMR239C 1416 nt4.84□□□□□ -1.63
MSH4P40965 YJL049WYJL049W 1353 nt4.84□□□□□ -1.63
MSH4P40965 Q0032Q0032 291 nt4.84□□□□□ -1.63
MSH4P40965 SDC1YDR469W 528 nt4.84□□□□□ -1.63
MSH4P40965 BUD13YGL174W 801 nt4.84□□□□□ -1.63
MSH4P40965 PBI2YNL015W 228 nt4.84□□□□□ -1.63
MSH4P40965 EGT2YNL327W 3126 nt4.84□□□□□ -1.63
MSH4P40965 CDC5YMR001C 2118 nt4.84□□□□□ -1.64
MSH4P40965 PMC1YGL006W 3522 nt4.84□□□□□ -1.64
MSH4P40965 HCM1YCR065W 1695 nt4.83□□□□□ -1.64
MSH4P40965 RIA1YNL163C 3333 nt4.83□□□□□ -1.64
MSH4P40965 PUB1YNL016W 1362 nt4.83□□□□□ -1.64
MSH4P40965 NTH1YDR001C 2256 nt4.83□□□□□ -1.64
MSH4P40965 ECL1YGR146C 636 nt4.83□□□□□ -1.64
MSH4P40965 SDL1YIL167W 633 nt4.83□□□□□ -1.64
MSH4P40965 YIL175WYIL175W 318 nt4.83□□□□□ -1.64
MSH4P40965 YLR224WYLR224W 1110 nt4.83□□□□□ -1.64
MSH4P40965 CDC42YLR229C 576 nt4.83□□□□□ -1.64
MSH4P40965 FLD1YLR404W 858 nt4.83□□□□□ -1.64
MSH4P40965 ATP18YML081C-A 180 nt4.83□□□□□ -1.64
MSH4P40965 IST1YNL265C 897 nt4.83□□□□□ -1.64
MSH4P40965 YOR131CYOR131C 657 nt4.83□□□□□ -1.64
MSH4P40965 snR24snR24 89 nt4.83□□□□□ -1.64
MSH4P40965 MCP2YLR253W 1710 nt4.83□□□□□ -1.64
MSH4P40965 PIG2YIL045W 1617 nt4.83□□□□□ -1.64
MSH4P40965 ATG26YLR189C 3597 nt4.83□□□□□ -1.64
MSH4P40965 NEL1YHR035W 1893 nt4.82□□□□□ -1.64
MSH4P40965 YCR013CYCR013C 648 nt4.82□□□□□ -1.64
MSH4P40965 RRP42YDL111C 798 nt4.82□□□□□ -1.64
MSH4P40965 RPA14YDR156W 414 nt4.82□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 220.4 ms