Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 OR7E47P-201ENST00000546390 1422 ntBASIC14.96□□□□□ -0.01
LINC01549A6NIU2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC01549A6NIU2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01549A6NIU2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01549A6NIU2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01549A6NIU2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01549A6NIU2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.96□□□□□ -0.02
LINC01549A6NIU2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01549A6NIU2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 AC006128.1-201ENST00000624704 1661 ntBASIC14.94□□□□□ -0.02
LINC01549A6NIU2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 MIR6722-201ENST00000617286 78 ntBASIC14.94□□□□□ -0.02
LINC01549A6NIU2 AC074183.2-201ENST00000623112 922 ntBASIC14.94□□□□□ -0.02
LINC01549A6NIU2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LINC01549A6NIU2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 AL034346.1-201ENST00000568244 1277 ntBASIC14.93□□□□□ -0.02
LINC01549A6NIU2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01549A6NIU2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 AC068587.7-201ENST00000641602 218 ntBASIC14.92□□□□□ -0.02
LINC01549A6NIU2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms