Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 PIH1D1-217ENST00000599366 833 ntTSL 316.39■□□□□ 0.211e-23■□□□□ 8.6
DDX3XO00571 PIH1D1-218ENST00000599791 966 ntTSL 216.39■□□□□ 0.211e-23■□□□□ 8.6
DDX3XO00571 PIH1D1-213ENST00000597415 874 ntTSL 516.36■□□□□ 0.211e-23■□□□□ 8.6
DDX3XO00571 PIH1D1-207ENST00000595550 583 ntTSL 215.97■□□□□ 0.151e-23■□□□□ 8.6
DDX3XO00571 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.041e-23■□□□□ 8.6
DDX3XO00571 PIH1D1-203ENST00000593900 932 ntTSL 214.98□□□□□ -0.011e-23■□□□□ 8.6
DDX3XO00571 PIH1D1-205ENST00000595074 1037 ntTSL 214.22□□□□□ -0.131e-23■□□□□ 8.6
DDX3XO00571 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.45■□□□□ 0.381e-14■□□□□ 8.6
DDX3XO00571 SLC13A3-206ENST00000420568 1256 ntTSL 516.43■□□□□ 0.225e-10■□□□□ 8.6
DDX3XO00571 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC12.28□□□□□ -0.445e-10■□□□□ 8.6
DDX3XO00571 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.419e-8■□□□□ 8.6
DDX3XO00571 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.439e-8■□□□□ 8.6
DDX3XO00571 CIZ1-224ENST00000498156 642 ntTSL 58.7□□□□□ -1.029e-8■□□□□ 8.6
DDX3XO00571 DHFR-204ENST00000508282 545 ntTSL 37.55□□□□□ -1.21e-12■□□□□ 8.6
DDX3XO00571 DHFR-207ENST00000513314 582 ntTSL 36.81□□□□□ -1.321e-12■□□□□ 8.6
DDX3XO00571 CHERP-204ENST00000546538 1429 ntTSL 1 (best)18.79■□□□□ 0.66e-13■□□□□ 8.6
DDX3XO00571 SRP14-206ENST00000559439 743 ntTSL 37.18□□□□□ -1.266e-13■□□□□ 8.6
DDX3XO00571 HBBP1-201ENST00000433329 439 ntBASIC7.73□□□□□ -1.176e-8■□□□□ 8.6
DDX3XO00571 RPL13A-208ENST00000477613 796 ntTSL 517.95■□□□□ 0.461e-86■□□□□ 8.6
DDX3XO00571 RPL13A-209ENST00000479992 850 ntTSL 316.58■□□□□ 0.241e-86■□□□□ 8.6
DDX3XO00571 RPL13A-204ENST00000472481 728 ntTSL 215.94■□□□□ 0.141e-86■□□□□ 8.6
DDX3XO00571 RPL13A-211ENST00000486930 652 ntTSL 315.77■□□□□ 0.121e-86■□□□□ 8.6
DDX3XO00571 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)15.61■□□□□ 0.091e-86■□□□□ 8.6
DDX3XO00571 RPL13A-202ENST00000467825 660 ntTSL 515.38■□□□□ 0.051e-86■□□□□ 8.6
DDX3XO00571 RPL13A-212ENST00000488946 2312 ntTSL 215.3■□□□□ 0.041e-86■□□□□ 8.6
DDX3XO00571 RPL13A-210ENST00000484279 794 ntTSL 514.19□□□□□ -0.141e-86■□□□□ 8.6
DDX3XO00571 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.19□□□□□ -0.141e-86■□□□□ 8.6
DDX3XO00571 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.21e-86■□□□□ 8.6
DDX3XO00571 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC13.72□□□□□ -0.213e-7■□□□□ 8.6
DDX3XO00571 MRPS18C-208ENST00000512375 2482 ntTSL 211.97□□□□□ -0.493e-6■□□□□ 8.6
DDX3XO00571 MRPS18C-204ENST00000507019 666 ntTSL 2 BASIC11.6□□□□□ -0.553e-6■□□□□ 8.6
DDX3XO00571 MRPS18C-205ENST00000507349 350 ntTSL 3 BASIC10.21□□□□□ -0.773e-6■□□□□ 8.6
DDX3XO00571 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.143e-6■□□□□ 8.6
DDX3XO00571 MRPS18C-207ENST00000509970 855 ntTSL 37.37□□□□□ -1.233e-6■□□□□ 8.6
DDX3XO00571 MRPS18C-203ENST00000505719 490 ntTSL 36.41□□□□□ -1.383e-6■□□□□ 8.6
DDX3XO00571 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.344e-14■□□□□ 8.6
DDX3XO00571 EGLN3-205ENST00000547327 2849 ntBASIC14.81□□□□□ -0.044e-14■□□□□ 8.6
DDX3XO00571 EGLN3-203ENST00000487915 848 ntTSL 59.18□□□□□ -0.944e-14■□□□□ 8.6
DDX3XO00571 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.53■□□□□ 0.562e-10■□□□□ 8.6
DDX3XO00571 SLC3A2-213ENST00000539458 565 ntTSL 518.12■□□□□ 0.492e-10■□□□□ 8.6
DDX3XO00571 SLC3A2-221ENST00000544377 589 ntTSL 417.06■□□□□ 0.322e-10■□□□□ 8.6
DDX3XO00571 SLC3A2-216ENST00000541372 269 ntTSL 515.98■□□□□ 0.152e-10■□□□□ 8.6
DDX3XO00571 SLC3A2-211ENST00000538084 741 ntTSL 315.1■□□□□ 0.012e-10■□□□□ 8.6
DDX3XO00571 GSN-214ENST00000485767 6454 ntTSL 1 (best)10.44□□□□□ -0.743e-17■□□□□ 8.6
DDX3XO00571 COL9A3-202ENST00000452372 596 ntTSL 520.69■□□□□ 0.96e-17■□□□□ 8.6
DDX3XO00571 MTPAP-205ENST00000488290 4103 ntTSL 213.45□□□□□ -0.263e-15■□□□□ 8.6
DDX3XO00571 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.343e-15■□□□□ 8.6
DDX3XO00571 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.683e-15■□□□□ 8.6
DDX3XO00571 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.29■□□□□ 0.361e-15■□□□□ 8.6
DDX3XO00571 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.73■□□□□ 0.271e-15■□□□□ 8.6
DDX3XO00571 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.261e-15■□□□□ 8.6
DDX3XO00571 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.85□□□□□ -0.031e-15■□□□□ 8.6
DDX3XO00571 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.77□□□□□ -0.051e-15■□□□□ 8.6
DDX3XO00571 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.121e-15■□□□□ 8.6
DDX3XO00571 RNU2-2P-201ENST00000410396 191 ntBASIC3.19□□□□□ -1.93e-30■□□□□ 8.6
DDX3XO00571 AC016065.1-202ENST00000606853 1137 nt23.43■■□□□ 1.345e-11■□□□□ 8.6
DDX3XO00571 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.12■■□□□ 1.295e-11■□□□□ 8.6
DDX3XO00571 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.92■■□□□ 1.15e-11■□□□□ 8.6
DDX3XO00571 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.65■□□□□ 0.95e-11■□□□□ 8.6
DDX3XO00571 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.54■□□□□ 0.725e-11■□□□□ 8.6
DDX3XO00571 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.21■□□□□ 0.675e-11■□□□□ 8.6
DDX3XO00571 PCMTD2-211ENST00000610196 476 ntTSL 318■□□□□ 0.475e-11■□□□□ 8.6
DDX3XO00571 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.295e-11■□□□□ 8.6
DDX3XO00571 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.51■□□□□ 0.075e-11■□□□□ 8.6
DDX3XO00571 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.7□□□□□ -0.065e-11■□□□□ 8.6
DDX3XO00571 TEX22-202ENST00000548638 508 ntTSL 512.09□□□□□ -0.475e-11■□□□□ 8.6
DDX3XO00571 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.565e-11■□□□□ 8.6
DDX3XO00571 RNA5SP389-201ENST00000362610 115 ntBASIC8.19□□□□□ -1.15e-11■□□□□ 8.6
DDX3XO00571 PCMTD2-208ENST00000609764 572 ntTSL 46.72□□□□□ -1.335e-11■□□□□ 8.6
DDX3XO00571 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.31e-18■□□□□ 8.5
DDX3XO00571 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.19■■□□□ 1.32e-7■□□□□ 8.5
DDX3XO00571 KMT2D-203ENST00000547610 636 ntTSL 521.95■■□□□ 1.13e-14■□□□□ 8.5
DDX3XO00571 ZNF37BP-204ENST00000473592 2929 ntTSL 1 (best)18.05■□□□□ 0.482e-7■□□□□ 8.5
DDX3XO00571 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.32■□□□□ 0.042e-7■□□□□ 8.5
DDX3XO00571 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC10.35□□□□□ -0.752e-7■□□□□ 8.5
DDX3XO00571 GDPD5-203ENST00000524785 239 ntTSL 35.85□□□□□ -1.472e-7■□□□□ 8.5
DDX3XO00571 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.786e-7■□□□□ 8.5
DDX3XO00571 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.746e-7■□□□□ 8.5
DDX3XO00571 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.446e-7■□□□□ 8.5
DDX3XO00571 DNTTIP2-203ENST00000460191 3084 ntTSL 215.91■□□□□ 0.146e-7■□□□□ 8.5
DDX3XO00571 LYRM4-204ENST00000463032 1487 ntTSL 1 (best)14.14□□□□□ -0.156e-7■□□□□ 8.5
DDX3XO00571 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.39□□□□□ -0.276e-7■□□□□ 8.5
DDX3XO00571 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC12.76□□□□□ -0.376e-7■□□□□ 8.5
DDX3XO00571 IMMP2L-210ENST00000492938 587 ntTSL 312.75□□□□□ -0.376e-7■□□□□ 8.5
DDX3XO00571 LRRC8B-202ENST00000358200 1957 ntTSL 5 BASIC12.65□□□□□ -0.386e-7■□□□□ 8.5
DDX3XO00571 PPIA-209ENST00000494484 2149 ntTSL 212.07□□□□□ -0.486e-7■□□□□ 8.5
DDX3XO00571 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC11.94□□□□□ -0.56e-7■□□□□ 8.5
DDX3XO00571 IMMP2L-206ENST00000452753 421 ntTSL 510.48□□□□□ -0.736e-7■□□□□ 8.5
DDX3XO00571 LYRM4-207ENST00000480566 941 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.746e-7■□□□□ 8.5
DDX3XO00571 DNTTIP2-206ENST00000496672 811 ntTSL 1 (best)9.52□□□□□ -0.896e-7■□□□□ 8.5
DDX3XO00571 PPIA-206ENST00000480603 842 ntTSL 39.35□□□□□ -0.916e-7■□□□□ 8.5
DDX3XO00571 DNTTIP2-201ENST00000359208 2199 ntTSL 28.47□□□□□ -1.056e-7■□□□□ 8.5
DDX3XO00571 DNTTIP2-207ENST00000528680 499 ntTSL 38.08□□□□□ -1.126e-7■□□□□ 8.5
DDX3XO00571 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.166e-7■□□□□ 8.5
DDX3XO00571 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.5□□□□□ -1.376e-7■□□□□ 8.5
DDX3XO00571 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.566e-7■□□□□ 8.5
DDX3XO00571 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.82□□□□□ -1.321e-16■□□□□ 8.5
DDX3XO00571 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.491e-16■□□□□ 8.5
DDX3XO00571 DDX3X-210ENST00000615313 568 ntTSL 419.7■□□□□ 0.749e-18■□□□□ 8.5
DDX3XO00571 DDX3X-206ENST00000542215 1592 ntTSL 218.21■□□□□ 0.519e-18■□□□□ 8.5
Retrieved 100 of 47,714 protein–RNA pairs in 3786.6 ms